Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 228 1e-54 >seq2 Length=3929205 Score = 228 bits (252), Expect = 1e-54 Identities = 596/894 (67%), Gaps = 20/894 (2%) Strand=Plus/Minus Query 62828 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 62887 ||||| || || || | || || ||||| | ||| || |||||||| || || ||| | Sbjct 1716635 ATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAA 1716576 Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 62946 || ||||| || ||| |||||| || | ||| || | ||| | | || ||||||| | Sbjct 1716575 GGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACA-GCTTCTGAGCCTTGAC 1716517 Query 62947 TATAGATTTGT-ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTC 63003 || | | | | | | |||| |||||||| ||| | ||||||| || Sbjct 1716516 ---AGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTC 1716460 Query 63004 TCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63063 || | |||| | || || ||| |||| || || | | | ||| || || Sbjct 1716459 GCCATAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTT 1716400 Query 63064 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 63123 | || || || ||||| || ||||||||| |||| || || ||||| || | | Sbjct 1716399 TTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGC 1716340 Query 63124 TCTATGTTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATAATATCAGAAT 63182 | ||| || || || ||||| | ||| || | || | | | ||| | || Sbjct 1716339 ACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAA-AAGTCGAAGACATCCGCAT 1716281 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 |||| || |||| ||| ||||| | | || || || ||||| || || || || | | Sbjct 1716280 GCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACAT 1716221 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 | | || ||||| || | ||||| | ||| || || | |||||||| ||||| |||| Sbjct 1716220 AACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGG 1716161 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCC 63360 | || | || || ||| |||||||||| | | ||||| |||| || || || Sbjct 1716160 TGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGA--GACCAATACCGCC 1716103 Query 63361 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 63420 || | || ||||| | || || || | ||||| ||||||||||| || || || Sbjct 1716102 AGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTC 1716043 Query 63421 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63480 ||| |||||| || | ||| || ||||| |||| | || ||||| ||||| || Sbjct 1716042 CTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAA 1715983 Query 63481 TAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63540 | ||||||||||||||||||||| || || | ||| | |||||||| ||||| || || Sbjct 1715982 CAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGC 1715923 Query 63541 TGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598 ||| | ||| | |||||| || || | |||||||| |||||||| || ||| Sbjct 1715922 --CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGT 1715865 Query 63599 CTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63657 | |||| | | |||| ||| || || | |||||| ||| | ||||| || || || || Sbjct 1715864 CGTTCAGC-AACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCC 1715806 Query 63658 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711 ||| || | ||| |||||||| || || | ||| |||||||||| | ||| Sbjct 1715805 AAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATC 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631778228800