Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=6183525 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || ||| |||||||| ||||||| || || ||| Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || || ||||| || || || ||||| ||||| Sbjct 607526 GACACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 607467 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || || || ||||||||||| | ||| ||| | || ||||| Sbjct 607466 CAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAAC 607407 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || ||| | || || || |||||||||| Sbjct 607406 ATCCAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGAGGAGG 607360 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| || || || || | || ||| | ||||| ||||| || Sbjct 607358 ATGCAGATCTTTGTCAAGACATTAACTGGAAAGACGATTACACTGGAAGTTGAGTCATCG 607299 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| |||||| ||||| || || || |||||||||||| Sbjct 607298 GATACCATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAA 607239 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| |||||||| || || |||| |||||| | || ||||| Sbjct 607238 CAGCGATTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGCACGCTCTCTGACTACAAC 607179 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || ||| ||| ||||| || ||||| || || Sbjct 607178 ATCCAGAAGGAAAGCACTCTACACTTGGTGCTGAGACT 607141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327852126820