Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 >seq1 Length=6183525 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||| || || ||| | || || ||||| || | | Sbjct 607358 ATGCAGATCTTTGTCAAGACATTAACTGGAAAGACGATTACACTGGAAGTTGAGTCATCG 607299 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||||| |||||||||||||| || ||||| || ||| Sbjct 607298 GATACCATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAA 607239 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| ||||||||||| |||||| ||||| |||| || |||||| Sbjct 607238 CAGCGATTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGCACGCTCTCTGACTACAAC 607179 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||| ||| |||| || || || || | || || ||| Sbjct 607178 ATCCAGAAGGAAAGCACTCTACACTTGGTGCTGAGACTTCGTGGCGGT 607131 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || ||||| |||| || ||||| ||| | | Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || |||||||||||||||||||| ||||| || || Sbjct 607526 GACACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 607467 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || || || || ||||| || || || | || || |||||| Sbjct 607466 CAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAAC 607407 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | ||| | || || |||| | |||||| Sbjct 607406 ATCCAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGAGGAGGT 607359 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || || |||| || || || ||| | | Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| || ||||| || ||||| ||||| || Sbjct 607754 GATACCATCGACAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAG 607695 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| ||||| || | || ||| || ||| |||| || |||||| Sbjct 607694 CAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAAC 607635 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || ||||| ||| Sbjct 607634 ATTCAGAAGGAATCGACC 607617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727856767820