Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 9e-14 >seq4 Length=3791951 Score = 93.3 bits (102), Expect = 9e-14 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 ||||| || ||||| |||||||||||| |||||||| |||| ||| | | | | ||| Sbjct 3087813 TCTCTTTCAGGTGGCTGGAAGATGAAGTTGGCCCTCGCTCGTGCC-GTGTTCGAGGAGCC 3087755 Query 279762 -GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820 ||| | || ||||| |||||||| ||||||||| ||||| || ||||| |||||||| Sbjct 3087754 AGATATTCTTCTGCTGGATGAGCCTACCAACCACTTGGACGTCAAGAACGTTGCCTGGCT 3087695 Score = 84.2 bits (92), Expect = 4e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 |||||||| || || ||||| ||||| || || ||||| | || ||| || || Sbjct 3086769 CACTCTCGTATGCGTGGTCTCTCTGGCGGTCAACGTGTCAAGGTCGTGCTCGCTGCTTGC 3086710 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 | ||||||| |||||| ||||||| || |||||||| ||||||||||| ||||| || Sbjct 3086709 ACA-TGGCAACGACCTCACTTGATCGTCCTTGACGAGCCCACCAACTATCTCGACCGTGA 3086651 Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882 ||| ||||| || ||||| | || || | || || ||||| |||| || Sbjct 3086650 CTCCCTCGGCGCCTTGTCCAAGGCTCTCAAGACCTTCGAAGGTGGTGTCGTCATCATCTC 3086591 Query 280883 TCACAGCACAGAATT 280897 |||| | | ||||| Sbjct 3086590 CCACAACGCCGAATT 3086576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836431263548