Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 159 6e-34 seq4 138 2e-27 seq9 105 1e-17 seq8 95.1 2e-14 >seq1 Length=6183525 Score = 159 bits (176), Expect = 6e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || ||||| || || |||||||| || || || || || | || |||||||| ||| Sbjct 607384 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACCGTCTTCTAATTGC 607443 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 ||||| ||||| || | | ||| ||||| ||||| || || ||||||||||||||||| Sbjct 607444 TTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCTTGTCTTGAATCTTG 607503 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||| ||| || |||||||| | |||||| ||||| | |||||||||||||| || Sbjct 607504 CTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTGATGGTTTTTCCTGTC 607563 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || ||||| Sbjct 607564 AGCGTCTTGACAAAGATTTGCAT 607586 Score = 156 bits (172), Expect = 8e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | || ||||||||||| ||| || || |||||||| || || ||| Sbjct 607132 CCGCCACGAAGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAG 607191 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || ||||| || || || || || | || |||||||| ||||| Sbjct 607192 AGCGTGCGACCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGG 607251 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||| ||||||||||| || ||||| ||||||| |||||||| || | ||| || || Sbjct 607252 ATGCCCTCCTTGTCTTGGAT-TTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAAC 607310 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || ||||| || | |||||||| || |||||||| Sbjct 607311 TTCCAGTGTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || || || || || ||||| || || ||| Sbjct 607588 CCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAG 607647 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || || || || | | ||| |||||||| ||| Sbjct 607648 AGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 607707 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| ||| || |||||||| || | ||||| || Sbjct 607708 ATTCCTTCCTTATCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACC 607767 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||||||||||||||| || ||||| Sbjct 607768 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 129 bits (142), Expect = 1e-24 Identities = 143/187 (76%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||||||||| |||||||| || ||| || || | || ||||| | Sbjct 607835 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAA 607894 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||| || ||||| || || | || ||||| || ||||| ||||||||||| |||| Sbjct 607895 GTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAA 607954 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432 |||| | ||||||| || ||||| || ||| ||||| || || | ||||||||| ||| Sbjct 607955 TCTTGGACTTGACGTTGTCAATGGTATC-GCTGGATTCGACCTCAAGGGTGATGGTCTTT 608013 Query 68433 CCCGTGA 68439 || |||| Sbjct 608014 CCGGTGA 608020 >seq4 Length=3791951 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || ||| |||||| | || || || | ||||| |||||||| || Sbjct 1156136 TTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATC 1156195 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || ||| ||||| ||||| |||||||||||||| || ||||| | |||||| ||| Sbjct 1156196 AATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1156255 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||| || || |||||||||||||||||||| Sbjct 1156256 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 1156314 >seq9 Length=1825699 Score = 105 bits (116), Expect = 1e-17 Identities = 376/580 (65%), Gaps = 16/580 (3%) Strand=Plus/Plus Query 175953 GGGGAAGTCTCCTTGATGTCTCCCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATC 176012 |||| |||||| |||| || |||||||| || ||| |||| || ||| || || Sbjct 1083366 GGGGCAGTCTCTTTGACTTCGCCCTTGAAGCCACGAAACCAGGGTTGCATCGGTT---TC 1083422 Query 176013 GTCTCGTTGTTA---ATGAGGCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCC 176069 ||| | | | || | || || | |||||| |||||||||| || ||||| | Sbjct 1083423 CACTCTTCGCCAGCCATTCGTCGTTTGAGATTGTCGACGATATCCTCAGGATTGTAGTTC 1083482 Query 176070 GGAATGTTAGTGCTAAATCCTGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGG 176129 |||||| | || | || || || ||||| | ||| || || || | | || Sbjct 1083483 GGAATGGACGAACTCCAACCCGTGCCGATTCCGTCAGCTCCGTTGACGAGAATCATAGGA 1083542 Query 176130 ATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCCGTCATCCTCGAG---GTAGTTC 176186 || |||| |||||| || || || ||| | || ||||| || |||| | Sbjct 1083543 ATTATGGGTACATAGACCTCAGGCTCGATC---TTGCGATCATCATCTGTATTGTAGGTG 1083599 Query 176187 AGCAGACGCTCGTCGGCCTTGTGGAAAATATCCCGGGTGTTGGGGGACAGTTGTGTGAAG 176246 || || | ||||| |||| |||||| | | || || | || ||||| | |||||| Sbjct 1083600 AGAAGCGGTTCGTCTGCCTGGTGGAATAGTTTCCTGGCGAAAGGCGACAGCCGAGTGAAG 1083659 Query 176247 ATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGA 176306 ||||| | |||| || | || ||||| || ||| || | || || || ||| | Sbjct 1083660 ATATAACGAGCACTGGCGCAATCGTTGCCGCCCTGATTTCGCGTGCCAAACTGGCCGGAA 1083719 Query 176307 GGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCG 176366 |||| || | ||||| || || || ||||| | | ||||||| ||||| || | Sbjct 1083720 GGAACCAGTAGATTGACATTGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTT 1083779 Query 176367 CCCTGGAGAGACGCCTCGCCGTGGTGAT-AGCCGGCGTTCTCACTTGTGTATCCGGCAAA 176425 ||| || || | ||||||||||| | ||| | | | | ||| | |||||| Sbjct 1083780 TGCTGCAGGGAGGTTTCGCCGTGGTGGTAAGCAGTCATAC-CACCAACGAGAGCGGCAAG 1083838 Query 176426 CTGCGCGACTTTGAT-TTCTTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCC 176484 || || || || || | ||| | | || || || || || || | ||| | ||| | Sbjct 1083839 CTCGGCCACCTTCATGTCCTTCTTC-AGATTTCGTTTGAAACACGCGTACATGACCTTTC 1083897 Query 176485 GCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGA 176524 | || |||||||||||||||||||| || || ||||| Sbjct 1083898 GTTGACCAGGCTTCAGACCATCGACGACAGAGGGGATGGA 1083937 >seq8 Length=2671506 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || |||||| Sbjct 921320 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 921261 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| |||||||| ||| Sbjct 921260 AGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGA 921201 Query 68355 ATGCCTTCCTTGTCT 68369 || |||||||||||| Sbjct 921200 ATTCCTTCCTTGTCT 921186 Score = 84.2 bits (92), Expect = 4e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 |||||||||| | |||||| |||||||| || | || || || || | |||||| | Sbjct 921130 CTTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATAG 921071 Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||||||||||||||| |||||||| Sbjct 921070 TCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 921037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622077432160