Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 199 7e-46 seq7 95.1 2e-14 >seq2 Length=3929205 Score = 199 bits (220), Expect = 7e-46 Identities = 504/757 (67%), Gaps = 12/757 (2%) Strand=Plus/Minus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||| || |||||||| |||||||| || | | ||| ||| ||||||||| ||||| | Sbjct 1716708 GGCAAGATTGCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCACAA 1716649 Query 244747 GTTACTGCACTTG--ATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 ||| || ||| |||||||||| || || || ||| ||| ||||||| || ||| Sbjct 1716648 GTT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCC 1716591 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| || ||| | || |||||||| ||| || | || | | ||| || Sbjct 1716590 TTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGC 1716531 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | ||||||||| ||| |||| | || ||| ||||| || || ||| Sbjct 1716530 TTCTGAGCCTTGACAGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCC 1716471 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG-GCACGACGCCGGGCACATGAGACT 244983 ||||||| ||| |||| || | || ||||| || | | ||||| | ||| | Sbjct 1716470 TCGAACTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCATGA-GGGCAGAAGAGGGT 1716412 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || | | || || | || |||||| || || || |||| ||||| | ||| Sbjct 1716411 CCAATCCTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAA 1716352 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||||| | | | || || ||| ||||||||||| | ||||||||| || Sbjct 1716351 TAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAA 1716292 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||| || | ||||| ||||||| ||||| |||| ||| || || ||||||||||| || Sbjct 1716291 GACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACC 1716232 Query 245164 CTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 ||||| | ||| | || | |||||||| | || | || | | ||| || | Sbjct 1716231 TTGGTCGA-CATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGG 1716173 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG--TTGCTGATGGACAT 245280 || ||||||||||| ||||| | ||| || | | | | || || || | Sbjct 1716172 AGGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGA- 1716114 Query 245281 GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340 || | ||||| ||| ||||||||| | || ||| |||||| || || ||||| Sbjct 1716113 -CCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCC 1716055 Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCT 245400 ||| ||||||||| |||||||| | || |||||| || ||||| ||||||| || | Sbjct 1716054 CTCAATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGT 1715995 Query 245401 GCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||||| || || ||||| |||||| Sbjct 1715994 TCCAGCATTGAACAGGGTAGGAGAAGCGTGAGTAAAG 1715958 >seq7 Length=2764021 Score = 95.1 bits (104), Expect = 2e-14 Identities = 169/246 (69%), Gaps = 3/246 (1%) Strand=Plus/Minus Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| || || ||||| ||||| | ||| | || ||||| |||| | ||| Sbjct 772960 ATGCCCGGCCTGACTTTCTCTAACGAGTTGATCTCTCGTGATGAGGGCATGCACACCGAC 772901 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGG 42905 || || || || || | | ||||||| ||||||||| | ||||| | || | Sbjct 772900 TTCGCTTGTCTGTTGATGCAG---CACCTCAAGCACAAGCCAGCTCCGGAGCTGATCGAG 772844 Query 42906 GCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG 42965 ||||||| || ||||| | ||||||||||| ||| | ||| | | || || || Sbjct 772843 AGGGTCATCACTGAAGCCGTTGCCATCGAGAAGGAATTCTTGACGGATGCACTTCCAGTC 772784 Query 42966 TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025 |||| |||||||||| | | |||||| |||||||| | | ||||||||| | | Sbjct 772783 GCCCTCCTCGGCATGAATGCCAAGCTCATGCAGCAGTACATCGAATTCGTCGCCGATCGT 772724 Query 43026 CTCCTG 43031 || ||| Sbjct 772723 CTACTG 772718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338869481280