Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 >seq1 Length=6183525 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||||||| | || || | ||| | ||| ||||| || || ||||| || | Sbjct 607359 ACCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGA 607418 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || |||| |||| ||||| || ||||| || | || |||||||| | ||| Sbjct 607419 AAGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGG 607478 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | |||||||| | ||| | || | | ||| | | | ||||| ||||| | Sbjct 607479 GATACCCTCCTTGT-CTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGA 607537 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| ||||||||||| || || |||||||| |||||||||||||| Sbjct 607538 CTTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212609875520