Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 217 1e-51 >seq2 Length=3929205 Score = 217 bits (240), Expect = 1e-51 Identities = 1066/1670 (64%), Gaps = 36/1670 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGG 93773 || ||| | ||||||| |||||| || |||||| || ||| | |||||||| || Sbjct 1715791 AACTACCAATACTTTGGCTTCAAGACGTTGGAGAGATCATACTTGCTCAAGATCGGCAAA 1715850 Query 93774 CAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCA 93833 || | || | || ||||| || || || ||||||| || | | || ||||| ||| | Sbjct 1715851 CAAG-TTGCTGAACGACCACAACACATGTTGATGCGTGTGTCTGTTGGTATTCATGGCGA 1715909 Query 93834 CGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGC 93893 ||| | ||| | | | ||| || ||| | ||| | | ||| || Sbjct 1715910 TGACGTCGAGAAGGCCATCGAGACTTACAATCTGATGTCTCAGAAGTGCTTTACTCACGC 1715969 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA- 93952 | || ||||||||||| || || || || ||| || ||||||| || || ||| Sbjct 1715970 TTCTCCTACCCTGTTCAATGCTGGAACGCCTCAGCCCCAACTGTCTTCATGCTTTTTGAT 1716029 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 |||| | |||| ||| ||| || || | ||| | |||||| |||||| | | Sbjct 1716030 TGAC-ATGAAGGAGGACAGCATTGAGGGCATCTACGATACACTCAAGACCTGTGCTATGA 1716088 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || ||| || || || || ||| || ||| | | ||||||| || || | Sbjct 1716089 TCTCCAAGACCGCTGGCGGTATTGGTCTCAATGCTCACTGCATTCGTGCCACTGGCTCAT 1716148 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| || ||||| || |||||||| |||||| |||| ||||| | |||||||||| Sbjct 1716149 ACATTGCTGGCACCAACGGTACCTCCAATGGCCTCATCCCCATGCTAAGAGTCTTCAACA 1716208 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || || || ||||| ||||| | | | ||| | ||||| |||| | Sbjct 1716209 ACACTGCACGTTATGTCGACCAAGGTGGCAACAAGCGCCCAGGTGCCTTCGCCATCTACC 1716268 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||| ||||| || | || | || || | |||||||||||||| | Sbjct 1716269 TGGAGCCATGGCATGCGGATGTCTTCGACTTTTTGAACTTGAGGAAGAACCACGGCAAAG 1716328 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | ||||| |||||||| || ||| || || ||||| ||||| | Sbjct 1716329 AAGAAGTCCGTGCTCGTGACCTATTCTACGCCCTGTGGACTCCTGATCTTTTCATGAAGC 1716388 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||||||| | |||| || || || || |||| |||||| || | | Sbjct 1716389 GTGTTGAGAAAAACCAGGATTGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTG 1716448 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCC 94431 | || | ||| || || | | |||| |||| || | ||| | || | Sbjct 1716449 ATGTCTATGGCGAAAAGTTCGAGGCTCTCTATGAGAAATACGAAAAAGAAGGACGTGGTC 1716508 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | || | | | ||| |||||||||| || || | || | ||| ||||| Sbjct 1716509 -GCCAGACTGTCAAGGCTCAGAAGCTGTGGTATGCTATTCTTGAGGCTCAGACTGAGACC 1716567 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 ||||| || |||||| ||| |||||| | ||||| ||| ||||||| || || | Sbjct 1716568 GGTACACCTTACATCCTGTACAAGGATGCATGCAACGAGAAGAGCAACCAGAAGAACTTG 1716627 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || || ||||| || ||||||| ||||||||||||| ||||| || || ||| Sbjct 1716628 GGCACCATTCGAAGCTCAAACTTGTGCACGGAGATTGTCGAGTTCACTTCCCCTGATGAG 1716687 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC--A 94669 | ||||| || || || | ||| | ||| | |||||||| ||| | |||| Sbjct 1716688 GTGGCTGTCTGCAATCTTGCCTCGCTGGCACTGCCGACTTTCGT-CGATCAGTCTACTGG 1716746 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTG- 94728 || || ||||| ||| ||| | ||| || || ||| | || | Sbjct 1716747 CGAGTATGACTTCGGTCG-CCTGCACGAGGTT----AC------CCAAGTAGTCACTCGA 1716795 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||||| |||| | | || ||| |||| |||||| || || ||||| |||| ||| Sbjct 1716796 AACCTAAACAAGATCATTGACGTCAACTACTACCCGGTACCCGAGGCAAAGAAGAGCAAC 1716855 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 ||| ||||| || | || | || || || ||| | ||||| || | | | Sbjct 1716856 ATGAGACATCGACCTGTTGGTCTTGGTGTTCAAGGTCTGGCGGATGCTTTCCTCGCACTA 1716915 Query 94849 CGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 ||||| || | ||||||| || || | | | | || | | || ||||| | || Sbjct 1716916 CGTCTACCATTCGACTCTCCAGAAGCCAGACAG--CTCAACATTCAGATCTTCGAGACCA 1716973 Query 94907 TTTATTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 ||||| ||| || ||| | || || ||| |||| ||| || | | Sbjct 1716974 TTTATCACGCCGCATTGACAGCCTCTTGTGAGCTT-GCCA---AGGAACAAGGCACCTAT 1717029 Query 94966 GAATCGT-TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| ||| | | | | | || | ||| ||||| |||| | ||| | ||| ||| Sbjct 1717030 GAAACGTATGAGGGCAGC-CCAGTCTCACAAGGCATCCTTCAATATGACATGTGGAATGT 1717088 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTG 95083 | || || | || | |||||||| ||| || || || || || ||||||| Sbjct 1717089 CACTCCTTCCGACCTCTGGGACTGGGATAGC-CTGAAGGCAGAGATTGCTAAGCACGGTG 1717147 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 | ||| | ||||| || || |||||||| || || || || | |||||| | || | Sbjct 1717148 TCCGGAACTCCCTGCTAGTTGCTCCCATGCCTACTGCATCGACCTCCCAGATCTTGGGTA 1717207 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 ||||||| | || || || | ||| || ||| | || | || ||| | || || | Sbjct 1717208 ACAACGAATGCTTTGAGCCATACACATCGAACATCTATTCTCGACGTGTGTTGGCTGGTG 1717267 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGT 95262 |||||| || ||||| || || |||||| | || | |||||| | ||| | Sbjct 1717268 AATTCCAAGTTGTCAACCCATGGCTGCTGAAGGACCTGGTCGAC-CTGGGTCTCTGGTCT 1717326 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 ||||| | ||||||| | | || || || | |||||||| || | || Sbjct 1717327 GACAATATGAAGAACCGTATCATTGCCGAGGGTGGATCGATTCAGAACATTCCAAACATC 1717386 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || ||||| ||||| || ||||||||||| ||||| ||| ||||| Sbjct 1717387 CCTGATGACATTAAGGCTCTGTACAAGACCGTCTGGGAAATCAGTCAGCG 1717436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723026846880