Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 seq1 84.2 2e-11 seq8 82.4 8e-11 >seq4 Length=3791951 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||||| | || || |||||||||||| || |||| ||| Sbjct 1156134 CCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGA 1156193 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | | || || ||||| || || || ||||| ||||| ||| || || | |||| Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTG- 1156252 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||||| ||||||||||||| || | || || || || || || || || Sbjct 1156253 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 1156312 Query 138604 AA 138605 || Sbjct 1156313 AA 1156314 >seq1 Length=6183525 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | ||| | | | ||||| || || ||||||||||||||| Sbjct 607816 CCGCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTC 607875 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || ||||| || || | |||| |||||||| ||||| ||||| Sbjct 607876 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 607935 Query 138508 ATACCTTCTTTGTC 138521 || ||||| ||||| Sbjct 607936 ATTCCTTCCTTGTC 607949 >seq8 Length=2671506 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | |||||||| || |||||||||||| Sbjct 921320 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 921261 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||||||| || |||| |||| ||||| || ||||| || || Sbjct 921260 AGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGA 921201 Query 138508 ATACCTTCTTTGTCGGTG 138525 || ||||| ||||| ||| Sbjct 921200 ATTCCTTCCTTGTCTGTG 921183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262226308160