Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=6183525 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||||| | || | ||| || || || || || || |||||||| || Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| ||||||||||||| || || ||| | ||||| || || ||||| ||| Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||||| || || | || || || || ||| || Sbjct 607480 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACT 607539 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || |||||||| |||||||| || || ||||| ||||||||| Sbjct 607540 TCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCATA 607587 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| || ||| | | | ||||| | ||| Sbjct 607612 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCAAGTTGC 607671 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| || | ||||| || || |||||| |||||||||||||| || ||| ||| Sbjct 607672 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGAATCTTG 607731 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || |||||| | || || ||||| ||| || || | ||| ||||| || || || Sbjct 607732 CTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTG 607791 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || |||||||||||| Sbjct 607792 AGGGTCTTGACGAAAATTTGCATA 607815 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || ||||| || |||||||| ||||| || | | ||||||| | ||| Sbjct 607839 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAAGTTG 607898 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || |||||| | || | |||||| ||||| ||||||||||||||||| ||| || Sbjct 607899 CTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTT 607958 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || | || || |||||||| ||| || || | ||| ||||| || || || Sbjct 607959 GGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 608018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391878039980