Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq4 93.3 4e-14 >seq1 Length=6183525 Score = 120 bits (132), Expect = 3e-22 Identities = 160/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||| || ||||| || || |||||||| ||||| || || || ||| | || || Sbjct 607372 CTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTC--TGAAAGAGTTCGAC 607429 Query 45186 --TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTT 45243 || || ||||| || |||||| | ||||| |||||||||||||| || || || || | Sbjct 607430 CGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCT 607489 Query 45244 TATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 | |||||||| || || | || | || | |||||| || || ||||||||||| || Sbjct 607490 TGTCTTGAATCTTGCTCTTCA-CGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTG 607548 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || || || || ||||| |||||||| Sbjct 607549 ATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 102 bits (112), Expect = 7e-17 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || |||||||| || || || || || || ||| | ||| || Sbjct 607606 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCA 607665 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || ||||| | ||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 607666 AGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGA 607725 Query 45252 ATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 || || | || || | || | ||| || || || || || ||||| || | || | Sbjct 607726 ATCTTGCTCTTTACATTG--TCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCT 607783 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||||| || || || || ||||||||||| ||| || Sbjct 607784 TGCCGGTGAGGGTCTTGACGAAAATTTGCATACCGCCAC 607822 >seq4 Length=3791951 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||| || || || || ||||||| ||| || || | ||| ||||| ||| | | Sbjct 1156134 CCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGA 1156193 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 |||||||||||||||| || || |||||||| || || || || || |||| | Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 1156253 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | ||||||||||||||| || ||||| || | || ||||| || || || || || | Sbjct 1156254 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1156313 Query 45331 A 45331 | Sbjct 1156314 A 1156314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003041798880