Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23]
28 sequences; 32,912,349 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq4 93.3 4e-14
>seq1
Length=6183525
Score = 120 bits (132), Expect = 3e-22
Identities = 160/218 (73%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| || ||||| || || |||||||| ||||| || || || ||| | || ||
Sbjct 607372 CTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTC--TGAAAGAGTTCGAC 607429
Query 45186 --TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTT 45243
|| || ||||| || |||||| | ||||| |||||||||||||| || || || || |
Sbjct 607430 CGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCT 607489
Query 45244 TATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
| |||||||| || || | || | || | |||||| || || ||||||||||| ||
Sbjct 607490 TGTCTTGAATCTTGCTCTTCA-CGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTG 607548
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || || || || || ||||| ||||||||
Sbjct 607549 ATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586
Score = 102 bits (112), Expect = 7e-17
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || |||||||| || || || || || || ||| | ||| ||
Sbjct 607606 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCA 607665
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| || ||||| | ||||| ||||||||||| || ||||| ||||| ||||| |||
Sbjct 607666 AGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGA 607725
Query 45252 ATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
|| || | || || | || | ||| || || || || || ||||| || | || |
Sbjct 607726 ATCTTGCTCTTTACATTG--TCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCT 607783
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348
||||||| || || || || ||||||||||| ||| ||
Sbjct 607784 TGCCGGTGAGGGTCTTGACGAAAATTTGCATACCGCCAC 607822
>seq4
Length=3791951
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210
|||| || || || || ||||||| ||| || || | ||| ||||| ||| | |
Sbjct 1156134 CCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGA 1156193
Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270
|||||||||||||||| || || |||||||| || || || || || |||| |
Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 1156253
Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330
| | ||||||||||||||| || ||||| || | || ||||| || || || || || |
Sbjct 1156254 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1156313
Query 45331 A 45331
|
Sbjct 1156314 A 1156314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003041798880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |