Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 217 2e-51 seq9 82.4 9e-11 >seq2 Length=3929205 Score = 217 bits (240), Expect = 2e-51 Identities = 1135/1785 (64%), Gaps = 40/1785 (2%) Strand=Plus/Minus Query 115516 GGTTCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCC 115575 ||| || || |||||||||||||| | ||| | | |||||| |||||||| || Sbjct 1717630 GGTCCACGG-TGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCCA 1717572 Query 115576 GTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGA 115635 ||||| | ||| ||||||| | | ||||| || | | ||| | ||||| Sbjct 1717571 GTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCATGGTTGGC 1717512 Query 115636 -CTTTCC-ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCG 115693 |||| ||||| ||| | || || |||||||||||| || || || || | Sbjct 1717511 TCTTTGAGATGAAT--GTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAG 1717454 Query 115694 CCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATAT 115753 |||| | | ||| | |||||||||| || || |||| || |||||| | Sbjct 1717453 CCATCTGCAGAACAGTACGCTGACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGT 1717394 Query 115754 CATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCT 115810 |||| ||||| | || || || || || ||||| || | | |||| | | || Sbjct 1717393 CATCAGGGATGTTTGGAATGTTCTGAATCGATCCACC---CTCGGCAATGATACGGTTCT 1717337 Query 115811 TCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAA 115870 |||||| | ||||||||||| | | || |||| || || ||||||| Sbjct 1717336 TCATATTGTCAGACCAGAGACCCAGGTCGACCAGGTCCTTCAGCAGCCATGGGTTGACAA 1717277 Query 115871 CAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGC 115930 | || ||||| || | |||| ||||||||| | |||||||||||||||| Sbjct 1717276 CTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGC 1717217 Query 115931 ACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGC 115990 | || |||||||||||||| |||| || || || || |||||||| || | || ||| Sbjct 1717216 ATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGG 1717157 Query 115991 TGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT 116050 ||| |||| ||| | ||| | |||| ||| |||||||| || | Sbjct 1717156 AGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAGAGGTCGG 1717097 Query 116051 TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110 | | | |||||| ||| | || ||||| ||||| || |||| |||||| Sbjct 1717096 AAGGAGTGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTCAT 1717037 Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170 | || ||||| | ||| | ||| || | || | || | || ||||||| Sbjct 1717036 ACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTGAT 1716977 Query 116171 ACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGA 116229 | || ||||| || || || || | || || ||| || || || || | ||| Sbjct 1716976 AAATGGTCTCGAAGATCTGAATGTTGAGCTGTCT-GGCTTCTGGAGAGTCGAATGGTAGA 1716918 Query 116230 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289 || | || ||||||| |||||||| ||||| || |||| || ||||||||| Sbjct 1716917 CGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAGGTCGATGTCTC 1716858 Query 116290 ATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTT 116346 || || ||| || ||| || || || | || || || | | | ||| Sbjct 1716857 ATGTTGCTCTTCTTTGC---CTCGGGTACCGGGTAGTAGTTGACGTCAATGATCTTGTTT 1716801 Query 116347 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC 116406 || ||| ||||| || | || | || || || || | ||| | || ||| Sbjct 1716800 AGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATACTCGCCAGTA 1716741 Query 116407 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 116466 | || ||| | | || || || | || || ||||| || |||| |||||| Sbjct 1716740 GACTGATCGACGAAAGTCGGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCATCA 1716681 Query 116467 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 116526 |||| |||| | ||| ||||| ||||| ||||| || |||||||||||||||| Sbjct 1716680 GGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGTTC 1716621 Query 116527 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586 || || || ||| ||| || ||||||||||| || || || || || || ||||| Sbjct 1716620 TTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCA 1716561 Query 116587 GTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCT 116643 || || | || |||||||| | ||| | | || | | || | |||| ||||| | Sbjct 1716560 GTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTG-ACAGTCTGGCG--ACCA 1716504 Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGA 116702 || || || | ||||| || ||||| ||||| |||| ||| ||| || | || | Sbjct 1716503 CGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTC-GCCATAGACATCAGC 1716445 Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762 || || || |||| || || |||||||| | ||| | | |||||| ||||| Sbjct 1716444 AAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTT 1716385 Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 116822 |||||| || || || |||| || || |||| || || ||| || ||||||| | Sbjct 1716384 CATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTT 1716325 Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || || || | ||| | ||||||||| | || |||||| ||||| || |||||||| Sbjct 1716324 GCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTA 1716265 Query 116883 CACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939 | |||| | || ||| ||| | |||| ||||| | || || ||| Sbjct 1716264 GATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTT 1716205 Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGA 116997 || || | ||||| || |||| |||| || || || || || || || || Sbjct 1716204 GAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGA 1716145 Query 116998 GACTTGTTGGCTCTGA--CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 | | |||| | | || | | || || | ||||||||| || || ||| |||| Sbjct 1716144 GCC--AGTGGCACGAATGCAGTGAGCAT-TG-AGACCAATACCGCCAGCGGTCTTGGAGA 1716089 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | || || | |||| | ||||||| || || || ||| |||| | | | Sbjct 1716088 TCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAA 1716029 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175 | | ||||| |||| ||| ||| || || ||||| ||||| ||||| || | | Sbjct 1716028 TCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAG 1715969 Query 117176 CGTGGATGAA-CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT 117234 |||| | || || | || |||||| || ||| ||||| | | | | ||| Sbjct 1715968 CGTGAGTAAAGCACTTC-TGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCA 1715910 Query 117235 TCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 || || |||||||| | || || ||||| ||||||| ||| ||| Sbjct 1715909 TCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGT 1715865 >seq9 Length=1825699 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/242 (68%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 175927 ATCTTTGCCACCCATGAGA-CGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATAT 175985 ||| ||||| ||| ||| ||||| ||||| || || | || | || ||||||| || Sbjct 1083680 ATCGTTGCCGCCC-TGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACAT 1083738 Query 175986 TGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCAC 176045 |||| || |||| | | | | |||||| ||| || || | | |||||| ||| | Sbjct 1083739 TGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCGC 1083798 Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105 |||| ||||| || | | | | | || || || | || ||||||||||| || | Sbjct 1083799 CGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCCT 1083858 Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 176165 ||| || || | ||| ||||| ||||||||||||| || |||||| || || | Sbjct 1083859 TCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCAT 1083918 Query 176166 CG 176167 || Sbjct 1083919 CG 1083920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506985272480