Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23]
28 sequences; 32,912,349 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 217 2e-51
seq9 82.4 9e-11
>seq2
Length=3929205
Score = 217 bits (240), Expect = 2e-51
Identities = 1135/1785 (64%), Gaps = 40/1785 (2%)
Strand=Plus/Minus
Query 115516 GGTTCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCC 115575
||| || || |||||||||||||| | ||| | | |||||| |||||||| ||
Sbjct 1717630 GGTCCACGG-TGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCCA 1717572
Query 115576 GTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGA 115635
||||| | ||| ||||||| | | ||||| || | | ||| | |||||
Sbjct 1717571 GTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCATGGTTGGC 1717512
Query 115636 -CTTTCC-ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCG 115693
|||| ||||| ||| | || || |||||||||||| || || || || |
Sbjct 1717511 TCTTTGAGATGAAT--GTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAG 1717454
Query 115694 CCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATAT 115753
|||| | | ||| | |||||||||| || || |||| || |||||| |
Sbjct 1717453 CCATCTGCAGAACAGTACGCTGACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGT 1717394
Query 115754 CATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCT 115810
|||| ||||| | || || || || || ||||| || | | |||| | | ||
Sbjct 1717393 CATCAGGGATGTTTGGAATGTTCTGAATCGATCCACC---CTCGGCAATGATACGGTTCT 1717337
Query 115811 TCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAA 115870
|||||| | ||||||||||| | | || |||| || || |||||||
Sbjct 1717336 TCATATTGTCAGACCAGAGACCCAGGTCGACCAGGTCCTTCAGCAGCCATGGGTTGACAA 1717277
Query 115871 CAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGC 115930
| || ||||| || | |||| ||||||||| | ||||||||||||||||
Sbjct 1717276 CTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGC 1717217
Query 115931 ACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGC 115990
| || |||||||||||||| |||| || || || || |||||||| || | || |||
Sbjct 1717216 ATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGG 1717157
Query 115991 TGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT 116050
||| |||| ||| | ||| | |||| ||| |||||||| || |
Sbjct 1717156 AGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAGAGGTCGG 1717097
Query 116051 TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110
| | | |||||| ||| | || ||||| ||||| || |||| ||||||
Sbjct 1717096 AAGGAGTGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTCAT 1717037
Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170
| || ||||| | ||| | ||| || | || | || | || |||||||
Sbjct 1717036 ACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTGAT 1716977
Query 116171 ACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGA 116229
| || ||||| || || || || | || || ||| || || || || | |||
Sbjct 1716976 AAATGGTCTCGAAGATCTGAATGTTGAGCTGTCT-GGCTTCTGGAGAGTCGAATGGTAGA 1716918
Query 116230 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289
|| | || ||||||| |||||||| ||||| || |||| || |||||||||
Sbjct 1716917 CGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAGGTCGATGTCTC 1716858
Query 116290 ATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTT 116346
|| || ||| || ||| || || || | || || || | | | |||
Sbjct 1716857 ATGTTGCTCTTCTTTGC---CTCGGGTACCGGGTAGTAGTTGACGTCAATGATCTTGTTT 1716801
Query 116347 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC 116406
|| ||| ||||| || | || | || || || || | ||| | || |||
Sbjct 1716800 AGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATACTCGCCAGTA 1716741
Query 116407 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 116466
| || ||| | | || || || | || || ||||| || |||| ||||||
Sbjct 1716740 GACTGATCGACGAAAGTCGGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCATCA 1716681
Query 116467 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 116526
|||| |||| | ||| ||||| ||||| ||||| || ||||||||||||||||
Sbjct 1716680 GGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGTTC 1716621
Query 116527 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586
|| || || ||| ||| || ||||||||||| || || || || || || |||||
Sbjct 1716620 TTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCA 1716561
Query 116587 GTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCT 116643
|| || | || |||||||| | ||| | | || | | || | |||| ||||| |
Sbjct 1716560 GTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTG-ACAGTCTGGCG--ACCA 1716504
Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGA 116702
|| || || | ||||| || ||||| ||||| |||| ||| ||| || | || |
Sbjct 1716503 CGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTC-GCCATAGACATCAGC 1716445
Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762
|| || || |||| || || |||||||| | ||| | | |||||| |||||
Sbjct 1716444 AAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTT 1716385
Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 116822
|||||| || || || |||| || || |||| || || ||| || ||||||| |
Sbjct 1716384 CATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTT 1716325
Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882
|| || || | ||| | ||||||||| | || |||||| ||||| || ||||||||
Sbjct 1716324 GCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTA 1716265
Query 116883 CACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939
| |||| | || ||| ||| | |||| ||||| | || || |||
Sbjct 1716264 GATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTT 1716205
Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGA 116997
|| || | ||||| || |||| |||| || || || || || || || ||
Sbjct 1716204 GAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGA 1716145
Query 116998 GACTTGTTGGCTCTGA--CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055
| | |||| | | || | | || || | ||||||||| || || ||| ||||
Sbjct 1716144 GCC--AGTGGCACGAATGCAGTGAGCAT-TG-AGACCAATACCGCCAGCGGTCTTGGAGA 1716089
Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115
| || || | |||| | ||||||| || || || ||| |||| | | |
Sbjct 1716088 TCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAA 1716029
Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175
| | ||||| |||| ||| ||| || || ||||| ||||| ||||| || | |
Sbjct 1716028 TCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAG 1715969
Query 117176 CGTGGATGAA-CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT 117234
|||| | || || | || |||||| || ||| ||||| | | | | |||
Sbjct 1715968 CGTGAGTAAAGCACTTC-TGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCA 1715910
Query 117235 TCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
|| || |||||||| | || || ||||| ||||||| ||| |||
Sbjct 1715909 TCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGT 1715865
>seq9
Length=1825699
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/242 (68%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 175927 ATCTTTGCCACCCATGAGA-CGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATAT 175985
||| ||||| ||| ||| ||||| ||||| || || | || | || ||||||| ||
Sbjct 1083680 ATCGTTGCCGCCC-TGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACAT 1083738
Query 175986 TGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCAC 176045
|||| || |||| | | | | |||||| ||| || || | | |||||| ||| |
Sbjct 1083739 TGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCGC 1083798
Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105
|||| ||||| || | | | | | || || || | || ||||||||||| || |
Sbjct 1083799 CGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCCT 1083858
Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 176165
||| || || | ||| ||||| ||||||||||||| || |||||| || || |
Sbjct 1083859 TCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCAT 1083918
Query 176166 CG 176167
||
Sbjct 1083919 CG 1083920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506985272480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |