Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-24 seq8 105 2e-17 seq2 86.0 1e-11 >seq1 Length=6183525 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||||||||||| || ||||| ||||| || | ||||||||| | | || Sbjct 607593 TCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGT 607652 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| || ||||| || || ||||| | || |||||||| ||| |||||| Sbjct 607653 ACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCC 607712 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||||||||| ||| || |||| ||| || | | ||| || || | Sbjct 607713 TTCCTTATCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAG 607772 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || |||||||| Sbjct 607773 GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTG 607811 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| ||||| || ||||| || |||| ||||||||| || || | || ||| Sbjct 607831 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCT 607890 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| |||||||| |||||||||||||| ||| ||||||||| ||| Sbjct 607891 TCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 607950 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||| || | | ||| || || | ||||| ||| Sbjct 607951 TGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 608010 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 608011 TTTCCGGTGA 608020 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||||||| || |||||||| || ||||| |||| ||||||||| | | ||| | || Sbjct 607371 TCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACC 607430 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| | ||||| || |||||||| | || ||||||||||| || || || Sbjct 607431 GTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCTT 607490 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||||||| || | |||||| | || ||| || || | ||||| Sbjct 607491 GTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTGAT 607550 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| ||||| Sbjct 607551 GGTTTTTCCTGTCAGCGTCTTGACAAAGATTTG 607583 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||||||| || | ||| ||||| ||||| |||| ||||||||||| | || Sbjct 607138 CGAAGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGTG 607197 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||| || || || ||||| | ||||| ||||| || || || Sbjct 607198 CGACCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCC 607257 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || || ||| ||| |||| ||| || | || || || |||| Sbjct 607258 TCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACTTCCAGT 607317 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || | || || ||||| || || Sbjct 607318 GTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTG 607355 >seq8 Length=2671506 Score = 105 bits (116), Expect = 2e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | | ||| | || || Sbjct 921305 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 921246 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 || || ||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct 921245 TCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGAATTCCTTC 921193 >seq2 Length=3929205 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 167863 TCCTTCTTTTTCGTATCTCTCATAGAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAG 167922 |||||||||||||||| |||||||||| | ||||| | | || || | || |||| Sbjct 1716501 TCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAG 1716442 Query 167923 ACCGGGAGCTTCCTTCGGACAAAAGAGACTCCAATTTCCATCGGTCTCGACCCTCTTCAT 167982 ||||||||| || | || || ||||| |||||| | |||| || | |||||| Sbjct 1716441 ACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTTCAT 1716382 Query 167983 GAAGAGGTCGGAAGTCCAAATCGCGTAGAA 168012 ||| || || | |||||| | |||||||| Sbjct 1716381 GAAAAGATCAGGAGTCCACAGGGCGTAGAA 1716352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921177061876