Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq8 93.3 5e-14 >seq1 Length=6183525 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||||||| | || || ||||| | || ||||| ||||| |||||||| || Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || |||| || | ||||| || ||||| |||||||| |||||||| | || Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| ||||| |||| | ||| | | | ||||| ||||| || Sbjct 607480 ATACCCTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATGGTGTCAGATGATTCGAC 607538 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||||| || |||||||| || |||||||||||||| Sbjct 607539 TTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||||||| || ||||| |||| || || ||||| || ||||| Sbjct 607851 CTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAA 607910 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||||||||| ||||| ||||| ||| Sbjct 607911 GATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTTGGACTTGA-CGT 607969 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| ||||| || || | |||||||| || || || Sbjct 607970 TGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 608018 >seq8 Length=2671506 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 921285 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAA 921226 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| || |||||||||| || | | |||||||| Sbjct 921225 GATCAGACGTTGCTGGTCGGGGGGAATTCCTTCCTTGTC 921187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238202166560