Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq8 89.7 5e-13 seq4 84.2 2e-11 >seq1 Length=6183525 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| |||| || || | | Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | |||||| || || | || || || |||||||| |||||| Sbjct 607754 GATACCATCGACAATG--TAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACC 607697 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | || ||||| || || || || | || |||||| ||||||| Sbjct 607696 AGCAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACA 607637 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || |||||| |||| || || | || || ||| | ||||||| Sbjct 607636 ACATTCAGAAGGAATCGACCCTTCACCTTGTCCTCCGTCTTCGAGGCGG 607588 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| || || ||||||||| | || ||||| ||| ||| | | | | |||| | || Sbjct 608020 TCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACG-TCAAG 607962 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || || | ||||| || |||||||| | ||||| ||||| || || | ||| || Sbjct 607961 TCCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGA 607902 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || || || || |||| |||||||| | ||||||||||||||| || || | || || Sbjct 607901 AAGCAACTTGAAGACGGCCGCACCCTGAGCGACTACAACATCCAGAAAGAGTCCACCCTC 607842 Query 38445 CATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| | || || ||| | | ||||| Sbjct 607841 CATCTTGTCCTCCGTCTCCGTGGCGG 607816 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 ||||||| ||||| ||||| || || | ||||||||||| | || | || |||||| Sbjct 607274 AAAATCCAAGACAAGGAGGGCATCCCACCTGACCAACAGCGATTGATCTTTGCAGGCAAA 607215 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||| |||| || | ||||| ||| |||||||||||||| |||||| || || || Sbjct 607214 CAGTTGGAGGATGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAAAGCACTCTACAC 607155 Query 38448 TTGGTGCTG 38456 ||||||||| Sbjct 607154 TTGGTGCTG 607146 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||||| || || ||||||||||| |||| ||||| | | Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| || || | |||| Sbjct 607526 GACACCATTGACAACG--TGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACC 607469 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | ||| || || || | || |||| || || || ||||||| Sbjct 607468 AGCAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACA 607409 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| |||||| | || || ||| | || ||| | || ||||| || Sbjct 607408 ACATCCAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGAGGAGG 607360 >seq8 Length=2671506 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || ||||||||| ||||||| || || || || | ||| || || || || || Sbjct 921187 GACAAGGAAGGAATTCCCCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAACTCGAG 921246 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| ||||| |||| || || | || || Sbjct 921247 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 921306 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 921307 CGTCTGCGTGGTGG 921320 >seq4 Length=3791951 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | |||||| | | Sbjct 1156314 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1156255 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| || || || || | ||||| || || | Sbjct 1156254 GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCACCTGACCAGCAACGATTG 1156195 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || |||| || || |||| |||||||||||| || ||| Sbjct 1156194 ATCTTCGCCGGAAAGCAACTCGAGGACGGCCGAACACTCAGCGACTACAACATTCAGAAG 1156135 Query 38433 G 38433 | Sbjct 1156134 G 1156134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172624939520