Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 123 1e-22 seq5 96.9 1e-14 >seq1 Length=6183525 Score = 123 bits (136), Expect = 1e-22 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || || || || || || |||||||| ||| Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 391110 GATAACATTGAAGCTAT-TAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 |||| ||| || | || |||| | || ||||| |||||||||||||||||||| || | Sbjct 607754 GATACCATCGA--CAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACC 607697 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 | ||||| || || || |||| || |||||||||||||| | || | | || || | Sbjct 607696 AGCAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACA 607637 Query 391228 ATATTGATAAGGATGCAACACTTCAC 391253 | ||| | ||||| | || |||||| Sbjct 607636 ACATTCAGAAGGAATCGACCCTTCAC 607611 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||| || ||||| || || || || || ||||||||| Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || |||||||| ||||| || || || || || || Sbjct 607526 GACACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 607467 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| ||||||| ||| | ||||| || ||||| | | || || || Sbjct 607466 CAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAAC 607407 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || || | || | ||| | |||||| Sbjct 607406 ATCCAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGAGGA 607362 >seq5 Length=3726234 Score = 96.9 bits (106), Expect = 1e-14 Identities = 186/274 (68%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || || || ||||| || || || ||||| || || ||||| || || || Sbjct 176159 ACTGTCCCTGCCTACTTCAACGACATGCAGCGTCAAGCTACCAAGGATGCTGGTCAAATC 176100 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | || ||||| || | | || || ||||| || ||||| || || || || Sbjct 176099 GCTGGTCTTAACGTTCTCCGTGTCGTCAACGAGCCTACTGCCGCTGCGCTTGCCTACGGT 176040 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | ||||| | || || |||| || ||| | ||| | ||||| || Sbjct 176039 CTCG-------AAAAGGAGGAG--GACAAAATCATCGCAGTCTACGATCTCGGTGGTGGC 175989 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 ||| |||| ||| | ||| ||| || | || || || ||||| ||| | ||||| Sbjct 175988 ACTTTCGATATTTCCATCCTTGAAATCCAAAAGGGCGTCTTCGAAGTCAAGTCTACCAAC 175929 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 ||||||||||| | || ||||||||| | |||| Sbjct 175928 GGTGATACTCACTTGGGTGGTGAAGATTTCGATA 175895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717691211024