Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 221 1e-52 seq9 102 1e-16 >seq2 Length=3929205 Score = 221 bits (244), Expect = 1e-52 Identities = 1143/1786 (64%), Gaps = 63/1786 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||||| ||||| || | | ||||| ||||| || || | || | Sbjct 1715866 CCACAACACATGTTGATGCGTGTGTCTGTTGGTATTCATGGCGATGACGTCGAGAAGGCC 1715925 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| | |||||| | | || || | ||||| | || ||||| || Sbjct 1715926 ATCGAGACTTACAATCTGATGTCTCA-GAAGTGCTTTACTCACGCTTCTCCTACCCTGTT 1715984 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| ||||| || || |||||| |||| || || | |||| | |||||||| Sbjct 1715985 CAATGCTGGAACGCCTCAGCCCCAACTGTCTTCATGCTTTTTGATTGACATGAAGGAGGA 1716044 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | ||||| |||| || |||| ||||| ||||| ||| ||||| Sbjct 1716045 CAGCATTGAGGGCATCTACGATACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGG 1716104 Query 111851 TGGTATCGGG----ATGCACA-TCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903 ||||| || |||| || | ||| || | |||| | ||| || || | Sbjct 1716105 CGGTATTGGTCTCAATGCTCACTGCAT----TC-GTGCCACT--GGCTCATACATTGCTG 1716157 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | || || ||| || |||| | || || ||||| | || || ||| ||| || | Sbjct 1716158 GCACCAACGGTACCTCCAATGGCCTCATCCCCATGCTAAGAGTCTTCAACAACACTGCAC 1716217 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | ||||| |||||| ||| ||| | ||| || |||| |||| || |||| Sbjct 1716218 GTTATGTCGACCAAGGTGGCAACAAGCGCCC--AGGTGCCT-TCGCCATCTACCTGGAGC 1716274 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 ||||||| |||||| || | || || | | ||| | ||||| || | || || | Sbjct 1716275 CATGGCATGCGGATGTCTTCGACTTTTTGAACTTGAGGAAGAACCACGGCAAAGAAGAAG 1716334 Query 112078 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | |||| || || || |||| ||| || |||| ||| ||||| ||||||||| | ||| Sbjct 1716335 -TCCGTGCTCGTGACCTATTCTACGCCCTGTGGACTCCTGATCTTTTCATGAAGCGTGTT 1716393 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 ||| | | ||||| | ||||| || || | |||| |||||||| | |||| | Sbjct 1716394 GAGAAAAACCAGGATTGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTGATGTC 1716453 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC- 112255 || || |||| || || ||||| || ||||| ||||| | || | | | | Sbjct 1716454 TATGGCGAAAAGTTCGAGGCTCTCTATGAGAAATACGAAAAAGAAGGACGTG-GTCGCCA 1716512 Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 ||| || | || | || | ||||| | |||||||| || |||| || ||||| |||| Sbjct 1716513 GACTGT-CAAGGCTCAGAAGCTGTGGTATGCTATTCTTGAGGCTCAGACTGAGACCGGTA 1716571 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 |||| || || || ||||| || || || ||| | ||||| || || ||||| ||||| Sbjct 1716572 CACCTTACATCCTGTACAAGGATGCATGCAACGAGAAGAGCAACCAGAAGAACTTGGGCA 1716631 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || || || ||| | || || || || | || || || | |||||| || Sbjct 1716632 CCATTCGAAGCTCAAACTTGTGCACGGAGATTGTCGAGTTCACTTCCCCTGATGAGGTGG 1716691 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC-AAAGAC- 112492 |||| || || || || || | || || || | | || |||| || | | | | Sbjct 1716692 CTGTCTGCAATCTTGCCTCGCTGGCACTGCCGACTTTCGTCGATC---AGTCTACTGGCG 1716748 Query 112493 -ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 | ||| | | || ||||| ||||| || ||||| ||||||||||| Sbjct 1716749 AGTATGACTTCGGTCGCCTGCACGAGGTTACCCAAGTAGTCACTCGAAACCTAAACAAGA 1716808 Query 112552 TTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACC 112608 | ||||| || | ||||| || ||| || || || |||||||| | Sbjct 1716809 TCATTGACGTCAACTACTACCCGGTACCCGAG---GCAAAGAAGAGCAACATGAGACATC 1716865 Query 112609 GTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACG 112665 | || ||||||| ||||| |||||||| ||||||| ||| | || ||| | Sbjct 1716866 GACCTGTTGGTCTTGGTGTTCAAGGTCTGGCGGATGCTTTCCTCGCACTACGTCTAC--- 1716922 Query 112666 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACG 112725 |||| || || ||||| | | |||| | || || ||||| || ||||||| Sbjct 1716923 CATTCGACTCTCCAGAAGCCAGACAGCTCAACATTCAGATCTTCGAGACCATTTATCACG 1716982 Query 112726 CCGCTCTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 |||| |||| || || ||| | || ||| | || | |||||||| | |||| Sbjct 1716983 CCGC-ATTGACAGCCTCTTGTGAGCTTGCCAAGGAACAAGGCACCTATGAAACGTATGAG 1717041 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-T 112843 || |||| |||||||| | ||||||| ||| |||| |||| || | || | Sbjct 1717042 GGCAGCCCAGTCTCACAAGGCATCCTTCAATATGACATGT-GGAATGTCACTCCTTCCGA 1717100 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903 | || |||||||| || |||| | || || | ||| | || ||| || Sbjct 1717101 CCTCTGGGACTGGGATAGCCTGAAGGCAGAGATTGCTAAGCACGGTGTCCGGAACTCCCT 1717160 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 | | || || ||||| || || || ||| | || ||||||||||| || |||||||| Sbjct 1717161 GCTAGTTGCTCCCATGCCTACTGCATCGACCTCCCAGATCTTGGGTAACAACGAATGCTT 1717220 Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 ||| || ||||| ||||||||||| || | | || || || || |||| Sbjct 1717221 TGAGCCATACACATCGAACATCTATTCTCGACGTGTGTTGGCTGGTGAATTCCAAGTTGT 1717280 Query 113024 CAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 |||| ||| || || | ||||| || | ||||||||||| | |||||||| Sbjct 1717281 CAAC--CCATGGCTGCTGAAGGACCTGGTCGACCTGGGTCTCTGGTCTGACAATATGAAG 1717338 Query 113082 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT 113141 | | || | | |||||| || ||||| || ||| | || || ||||| ||| Sbjct 1717339 AACCGTATCATTGCCGAGGGTGGATCGATTCAGAACATTCCAAACATCCCTGATGACATT 1717398 Query 113142 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 113201 ||| ||||| || || |||||||||| | ||| | | ||||| || Sbjct 1717399 AAGGCTCTGTACAAGACCGTCTGGGAAATCAGTCAGCGTACTGTTCTGCAGATGGCTGCC 1717458 Query 113202 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGT-ATGAATCTATTCAT-GGAAAG-TCCA 113258 || |||||| |||||| |||| |||| ||| | | | |||||| |||| ||| Sbjct 1717459 GACCGTGGTGCCTTCATCGATC--AGTCTCAGTCACTCAAC-ATTCATCTCAAAGAGCCA 1717515 Query 113259 ACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGG 113318 || ||| ||| || | || |||||| | | | ||||||| ||| | || || || Sbjct 1717516 ACCATGGGTAAGATCACATCCATGCACTTTGCCGGCTGGAAGATGGGCTTGAAGACTGGC 1717575 Query 113319 ATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 113364 ||||| || |||||| ||| |||| | | || |||||||||| Sbjct 1717576 ATGTACTATCTCCGAACTATGGCAGCCACCCAACCCATTCAGTTCA 1717621 >seq9 Length=1825699 Score = 102 bits (112), Expect = 1e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 176039 CGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCA 176098 ||||| |||||||| || | || | || ||||||| |||||| || |||| | | Sbjct 1083699 CGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACATTGTTAGATCCCACAAAATTC 1083758 Query 176099 TTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCTTC 176158 | |||||| ||| || || | | || ||| ||| ||||||||||| ||| || | Sbjct 1083759 TGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCGCCGTGGTGGTAAGCAGTCATA 1083818 Query 176159 TCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAA 176218 | | || | || || | || ||||| ||||| || | ||| ||||| | |||| Sbjct 1083819 CCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCCTTCTTCAGATTTCGTTTGAAA 1083878 Query 176219 CATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATC 176259 || |||||||| ||||| ||||| |||||| |||||||| Sbjct 1083879 CACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCATC 1083919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742182740160