Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 224 1e-53 seq9 104 3e-17 >seq2 Length=3929205 Score = 224 bits (248), Expect = 1e-53 Identities = 569/856 (66%), Gaps = 16/856 (2%) Strand=Plus/Minus Query 110293 GACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACAC 110352 || ||||||||||| |||| ||| || | ||| | || | ||| ||||| ||| Sbjct 1716710 GAGGCAAGATTGCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCAC 1716651 Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412 ||||| || || |||| |||||||||||||| || || ||||||||||||| Sbjct 1716650 AAGTTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCC 1716591 Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-C 110471 || || || ||||| || ||||| || || ||||| | || ||||| || | ||| | | Sbjct 1716590 TTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGC 1716531 Query 110472 ATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || | | | | ||||| | | | | ||||| | ||||| || || | | Sbjct 1716530 TTCTGAGCCTTG-ACAGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGC 1716472 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||| || | | || || ||||||| |||||| |||| | || |||||||||| Sbjct 1716471 CTCGAACTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGT 1716412 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||||| | |||||| | ||||||||| || |||||| |||||| || |||| Sbjct 1716411 CCAATCCTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAA 1716352 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 |||||||| ||| | ||||| | || ||||| | | | ||||||||| | Sbjct 1716351 TAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAA 1716292 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACC 110765 || ||||| |||||||| || || |||| |||| || || ||| | ||| Sbjct 1716291 GACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACC 1716232 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 |||| ||||| ||||| ||| |||||||| || ||||| || || | |||| Sbjct 1716231 T---TGGTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATT 1716175 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 ||| ||| || || || ||| || | ||||||||||| ||| || | Sbjct 1716174 GGAGGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAG 1716115 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944 ||||||||| || || ||| || ||||| ||| |||||||| | || || | Sbjct 1716114 ACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCT-TGAGTGTATCGTAGATGC 1716056 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | ||||| || |||| || |||| | |||||| ||||||| || || |||||| Sbjct 1716055 CCTCAATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCG 1715996 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA-CAGACCTTGGGACATCTTGTTG 111063 |||| |||||||| || ||||| | || ||| | || || | || |||||| ||| Sbjct 1715995 TTCCAGCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTC-TGAGACATCAGATTG 1715937 Query 111064 TATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAAC 111123 || || |||| || || || | || |||||||||| | || ||||| ||| Sbjct 1715936 TAAGTCTCGATGGCCTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAAC 1715877 Query 111124 ATATATTGAGG-CGTT 111138 || | ||| || |||| Sbjct 1715876 ATGTGTTGTGGTCGTT 1715861 Score = 105 bits (116), Expect = 8e-18 Identities = 241/354 (68%), Gaps = 14/354 (4%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTT--T 109564 |||||||||||||||||||| |||||| || || ||||| | | || ||| | | Sbjct 1717490 GACTGAGACTGATCGATGAAGGCACCACGGTCGGCAGCCATCTGCA-GA-ACAGTACGCT 1717433 Query 109565 GGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGT 109624 | || ||||||||||| |||||||||| | ||| || ||||| || |||| |||| Sbjct 1717432 GACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGTCATCAGGGATGTTTGGAATGT 1717373 Query 109625 TTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGAC 109681 | ||||| || |||| ||| | |||| | | |||||| | | |||||||||| Sbjct 1717372 TCTGAATCGATCCAC---CCTCGGCAATGATACGGTTCTTCATATTGTCAGACCAGAGAC 1717316 Query 109682 CGACCTTTTTGAGAT-CGTCAACA-AGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 | | | || | | ||| || ||| |||||| || ||||||||||| | Sbjct 1717315 CCAGGTCGACCAGGTCCTTCAGCAGCCATG--GGTTGACAACTTGGAATTCACCAGCCAA 1717258 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 ||||| |||||||| | ||||| || || || || || ||||| || | ||| Sbjct 1717257 CACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGAT 1717198 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || | || || || || ||||||||||| | || || ||| |||| ||| Sbjct 1717197 CTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGGAGTTCCGGACACC 1717144 >seq9 Length=1825699 Score = 104 bits (114), Expect = 3e-17 Identities = 214/313 (68%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 167538 ATCCTTGCCACCCATGAGG-CGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGT 167596 ||| ||||| ||| ||| || || ||||| || || | || | || ||||||| | Sbjct 1083680 ATCGTTGCCGCCC-TGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACAT 1083738 Query 167597 TATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTT-CAGCGAGGGAAACTTCG 167655 | || || ||| | ||| | ||||||| |||||| |||| | || ||||| |||| Sbjct 1083739 TGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGC-AGGGAGGTTTCG 1083797 Query 167656 CCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCA 167715 ||||||||||||||| || | || | || || || | || || |||||||| || Sbjct 1083798 CCGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCC 1083857 Query 167716 TCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCA 167775 | || ||||| || |||||| | ||||| ||||| |||||| ||| || |||||| Sbjct 1083858 TTCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCA 1083917 Query 167776 TCTGCCACGTGAGCAATTGAGCGCTTCAGATCAGCAAGACTGAAATTCACCAAGTCTTTG 167835 || | || | || || | | ||||| | |||||| | ||| |||||| Sbjct 1083918 TCGACGACAGAGGGGATGGATCTTATGTTGTCAGCCATACTGAAGAGGATCAACTCTTTG 1083977 Query 167836 TGTACAAAATCAG 167848 | |||||||||| Sbjct 1083978 TTGACAAAATCAG 1083990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975793858400