Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq2 123 6e-23 >seq1 Length=6183525 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| || || || |||||||| || || || || ||||| || | |||||| Sbjct 607365 TCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGT 607424 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || ||||| | ||||| ||||||||||| | ||||| ||||| || || || || Sbjct 607425 TCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACC 607484 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||||||||| || ||| ||||| ||||||||||| || ||| ||||| || Sbjct 607485 CTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAG 607544 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||||| || || || || | |||||| Sbjct 607545 TGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||||||||| || || ||||| ||| || || | || ||||| Sbjct 607834 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCA 607893 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||||||||| || || ||||| |||||||| ||||| ||||| ||| Sbjct 607894 AGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGA 607953 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || ||| || |||||||| | |||||| Sbjct 607954 ATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTT 608013 Query 195112 CCTGT 195116 || || Sbjct 608014 CCGGT 608018 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || || || || ||||| ||||| || | || || | |||||||| Sbjct 607606 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCA 607665 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| ||||| ||||| | ||||| ||||| |||||||| ||||| || || ||| Sbjct 607666 AGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGA 607725 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||| || || ||| || || ||||| | ||||| Sbjct 607726 ATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 607785 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 607786 CCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 >seq2 Length=3929205 Score = 123 bits (136), Expect = 6e-23 Identities = 199/282 (71%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT---GAAAGACAATGGGGAT 160645 ||||||||| | |||||| | ||||||||||||||| | || |||| || | |||| Sbjct 1716352 TTCTACGCCCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAAAACCA---GGAT 1716408 Query 160646 TGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTC 160705 |||| ||| ||||| || |||| || || || |||| |||||| ||||| ||||| Sbjct 1716409 TGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTGATGTCTATGGCGAAAAGTTC 1716468 Query 160706 GAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAA 160765 ||| |||| ||||| | |||||||||||| ||| | | || || ||||| || Sbjct 1716469 GAGGCTCTCTATGAGAAATACGAAAAAGAAGGACGTGGTCGCCAGACTGTCAAGGCTCAG 1716528 Query 160766 GAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATAC 160825 | |||||| || || |||| || || ||| |||| || | ||| ||| Sbjct 1716529 AAGCTGTGGTATGCTATTCTTGAGGCTCAGACTGAGACCGGTACACCTTACATCCTGTAC 1716588 Query 160826 AAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGG 160866 ||||||| ||| || ||||| |||||||||||||| || Sbjct 1716589 AAGGATG-CATGCAACGAGAAGAGCAACCAGAAGAACTTGGG 1716629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481201973476