Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 >seq1 Length=6183525 Score = 105 bits (116), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||| |||||||| | |||||||| ||||| ||||| ||||| || || | || || Sbjct 607144 CTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCA 607203 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| |||||| || ||||| || | ||| || ||||| | || | ||||||||| Sbjct 607204 TCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCCTCCTTG 607263 Query 34887 TCGCTAATCTTCTGTTTGACG-----GATGCTAT-CGATTCACCGGCCTCAACATCGACG 34940 || || || |||||| |||| ||| |||| | |||||| || | Sbjct 607264 TCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGAT------GACTCAACTTCCAGT 607317 Query 34941 GTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || | ||||| ||||||||||||||| Sbjct 607318 GTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCATA 607359 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || || |||| || | || | ||| ||| ||||| ||||| ||||| ||| Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| | || || | || || || || || || | ||||||||||| | || Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| || ||| | || | ||| | || || Sbjct 607480 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACT 607539 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || ||||||||||| || || ||||| |||||||| |||||| Sbjct 607540 TCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCATA 607587 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/198 (71%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| || ||| | || |||| || || || || || ||||| Sbjct 607623 TTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAA 607682 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT-CTGTTTGACGG 34908 || | ||||||||||| | || | || ||||| || |||||| || ||| || Sbjct 607683 GATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGAATCTTGCTCTTT-AC-- 607739 Query 34909 ATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 || | ||||| ||| | ||||| |||| ||| ||||| || || ||||| ||| Sbjct 607740 AT--TGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 607797 Query 34965 TTCACAAAGATCTGCATA 34982 || || || || |||||| Sbjct 607798 TTGACGAAAATTTGCATA 607815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633489218784