Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 154 2e-32 >seq2 Length=3929205 Score = 154 bits (170), Expect = 2e-32 Identities = 532/820 (65%), Gaps = 20/820 (2%) Strand=Plus/Minus Query 47993 GTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGAT 48052 ||| ||||| |||||||| || || ||||||| || || || |||||| |||| || Sbjct 1716603 GTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAAT 1716544 Query 48053 AGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTT-----TATTATCATGTTCG 48107 || | ||| | || |||||| | ||| ||| || | | || | |||| Sbjct 1716543 AGCATACCACAGCTTCTGAGCCTTGA---CAG-TCTGGCGACCACGTCCT-TCTTTTTCG 1716489 Query 48108 TATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCA 48167 ||||| ||| | ||| || | || ||||| |||| | | | || ||| ||| Sbjct 1716488 TATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCA 1716429 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 | ||| || | | | |||||||| | || | || | |||| || | ||| || Sbjct 1716428 TGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGA 1716369 Query 48228 ATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT- 48286 |||| || || |||| || | || | | |||||| ||||| ||| | | Sbjct 1716368 GTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTC 1716309 Query 48287 AAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACC 48346 |||||||| |||||| | | ||| ||||||||||| || | || || || | |||| Sbjct 1716308 AAGTTCAA-AAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACC 1716250 Query 48347 TGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACAT 48406 ||| || || || || ||||| || | ||| | ||||| ||||| | ||||||| ||| Sbjct 1716249 TGGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCAT 1716190 Query 48407 TGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT 48466 |||| | ||||| || |||| ||||| || | ||| || ||| | || | || Sbjct 1716189 GGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAAT 1716130 Query 48467 --ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTA 48524 | | |||| | ||| ||||| || || | || || || | |||||| || Sbjct 1716129 GCAGTGAGCATTG--AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTG 1716072 Query 48525 AGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGAC 48584 || ||||| || || || || || || || || |||| | | | ||| || |||| Sbjct 1716071 AGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGAC 1716012 Query 48585 ATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTC 48644 | ||| || ||| ||||| | ||| || | || ||||| || ||| |||| || ||| Sbjct 1716011 AGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTC 1715952 Query 48645 TCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTA 48702 | || | || || || || || || | ||| | ||| | ||| ||||| | Sbjct 1715951 TGAGACATCAGATTGTAAGTCTCGATGGC--CTTCTCGACGTCATCGCCATGAATACCAA 1715894 Query 48703 TAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAA 48762 ||| |||||||| ||||| | ||| |||| |||| ||| || || || || | | Sbjct 1715893 CAGACACACGCATCAACATGTGTTGTGGTCGTTCAGCAACTTGTTTGCCGATCTTGAGCA 1715834 Query 48763 GATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 |||||| | ||||| || || || ||||| || | ||| Sbjct 1715833 AGTATGATCTCTCCAACGTCTTGAAGCCAAAGTATTGGTA 1715794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108603261920