Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=6183525 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || | || |||||| ||||| ||||| || || || || ||||| ||||| Sbjct 607132 CCGCCACGAAGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAG 607191 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || |||||||| || || ||||| |||| ||||||||| || | || Sbjct 607192 AGCGTGCGACCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGG 607251 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| || || || || | | | || || | ||| || Sbjct 607252 ATGCCCTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACT 607311 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| |||||||| ||||| || || || || ||||| |||||||| Sbjct 607312 TCCAGTGTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937470005044