Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 210 4e-49 seq7 100 5e-16 >seq2 Length=3929205 Score = 210 bits (232), Expect = 4e-49 Identities = 1234/1945 (63%), Gaps = 72/1945 (4%) Strand=Plus/Minus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 || ||| | || || |||||||||||||| ||||| | |||| | ||||||| | | Sbjct 1717601 GCTGCCATAGTTCGGAGATAGTACATGCCAGTCTTCAAGCCCATCTTCCAGCCGGCAAAG 1717542 Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGG 212696 ||||| | ||||| |||| | | | ||| ||| | | ||||| | | Sbjct 1717541 TGCATGGATGTGA---TCTTACCCATGGT----TGG-----CTCTTTG---AGATGAATG 1717497 Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756 || || |||||| ||| || ||||| | | | ||| || ||||| | | | | Sbjct 1717496 TTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAGCCATCTGCAGAACAGTA 1717437 Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816 | ||| || ||||| ||||||||| | | | || | ||| || |||| | || Sbjct 1717436 CGCTGACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGTCATCAGGGATGTTTGGA 1717377 Query 212817 ATGTTCTGCACAGACCC--CCTGTGTA-TGGTCAGCTGCAGGCGCATGTCCTCGTTCCAG 212873 |||||||| | || || ||| | | || | | | | ||| | || |||| Sbjct 1717376 ATGTTCTGAATCGATCCACCCTCGGCAATGATACGGTTCTT---CATATTGTCAGACCAG 1717320 Query 212874 AGGCCCCTGGTCT-CCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 || ||| |||| ||||| ||| | ||| |||||||| | ||||| ||||| | Sbjct 1717319 AGACCCA-GGTCGACCAGGTCCTTCAGCAGCCATGGGTTGACAACTTGGAATTCACCAGC 1717261 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 | ||| | | || | ||| || ||||| ||||| | || |||||||| |||| Sbjct 1717260 CAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAA 1717201 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 ||||| | || || || ||||||||||| || || || ||||| || ||||| Sbjct 1717200 GATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGGAGTTCCGGACACCGTG 1717141 Query 213053 CTCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 || | || || | ||| | |||||||||| | | || ||| Sbjct 1717140 CTTAGCAATCTCTGCCTTCAGGCTAT-CCCAGTCCCAGAGGTCGGA-AGGAG-------- 1717091 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 | || |||||||||||| | || | |||||||| || |||||||||| || | Sbjct 1717090 TGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTCATACGTTT 1717031 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 |||| ||| || |||||||| ||||| || || || || || |||| || |||| Sbjct 1717030 CATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTGATAAATGG 1716971 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA-TCATCATG 213290 | || || |||| ||||||||| |||| ||||| || ||| || | | | || Sbjct 1716970 TCTCGAAGATCTGAATGTTGAGCTGTCTGGCTTCTGGAGAGTCGAATGGTAGACGTAGTG 1716911 Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350 || |||| |||| ||||| || || || || | || | |||| ||||||| ||| Sbjct 1716910 CG-AGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAGGTCGATGTCTCATGTTG 1716852 Query 213351 GACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGG 213410 ||| ||| | ||||| ||||| ||| ||||||||||| ||||| || Sbjct 1716851 CTCTTCTTTGCCTCGGGTACCGGGTAGTAGTTGACGTCAATGATCTTGTTTAGGTTTCGA 1716792 Query 213411 GTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTA-GCCCCCGT--CC 213467 ||| | |||| ||| || | | ||| | || ||| | || | || || | Sbjct 1716791 GTGACTACTTGGGTAACCTCGTGCAG------GCGACCGAAGTCATACTCGCCAGTAGAC 1716738 Query 213468 TGCAC----AAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 || | ||| || ||||| || | ||| || ||||| || |||||||| | || Sbjct 1716737 TGATCGACGAAAGTC-GGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCATCAGG 1716679 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | ||| |||| | ||||| ||||||| ||| || ||| |||||||||| ||||| Sbjct 1716678 GGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGTTCTT 1716619 Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643 ||||| ||| ||||| | ||||||||| || ||||| || | |||||||| Sbjct 1716618 CTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCAGT 1716559 Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703 ||| | | | || || ||| || | | |||||||| | | | ||| | | Sbjct 1716558 CTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTGACAGTCTGGC-GACCACGTC 1716500 Query 213704 GGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAG 213763 | | ||||| | || ||||| | | ||| | | ||| |||| | || Sbjct 1716499 CTTCTT--TTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAG 1716442 Query 213764 TCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGC 213821 || ||| | ||| ||| || | |||| |||| ||| | | |||| || | || | Sbjct 1716441 ACCGGGAGCCTCATGAGGG-CAGAAGAGGGTCCAATCCTGGTTTTTCTC-AACACGCTTC 1716384 Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881 ||||| || || || |||||| ||| ||| ||||| | | | || || Sbjct 1716383 ATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTTG 1716324 Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941 || ||| || | || | | |||||| |||| ||||| ||||| ||||||| |||| Sbjct 1716323 CCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTAG 1716264 Query 213942 ATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998 ||||| ||||| || | || | ||||| || ||||| || | || ||||| Sbjct 1716263 ATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTTG 1716204 Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAG 214058 |||| | || | ||| | || || ||||| |||||||| || || || || ||| Sbjct 1716203 AAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGAG 1716144 Query 214059 CCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 || | ||| | | | || ||| |||| || || || || ||| ||||||||||| Sbjct 1716143 CCAGTGGCACGAATGCAGTGAGCATTGAGA--CCAATACCGCCAGCGGTCTTGGAGATCA 1716086 Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176 | || ||| | | | || || |||||| | |||||||| || | | || | || Sbjct 1716085 TAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAATCA 1716026 Query 214177 AGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCAT 214236 | ||||| || || |||||| | || |||| ||||| || || || || | Sbjct 1716025 AAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGT 1715966 Query 214237 GGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCT 214296 | | | |||| | ||| | || |||| ||||| | | | || ||| | Sbjct 1715965 GAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCATCGC 1715906 Query 214297 TGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTG 214355 || || | || | || | ||||| |||||| || || | || | |||| Sbjct 1715905 CATGAATACCAACAGACACA-CGCATCAACATGTGTTGTGGTCGTTCAGCAACTTGTTTG 1715847 Query 214356 GGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG--GTAT 214413 | |||||||| ||| || | ||||| |||||||| |||||||| |||| | | Sbjct 1715846 CCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAG 1715787 Query 214414 GATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGC-TCTTGGCTCAGCTTG 214472 ||| | | | || | ||| | || ||||| || |||||| || || | || || | Sbjct 1715786 TCTCGGT--CATATACAATGGCCGAGTTGAGCTCATCGGCGTGCTTCATGACACA-CTCG 1715730 Query 214473 AAAATCTCGTCCGAGATCAAGGGAG 214497 || |||| | |||||||| ||||| Sbjct 1715729 TAAGTCTCTTTCGAGATCATGGGAG 1715705 >seq7 Length=2764021 Score = 100 bits (110), Expect = 5e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || | ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 773021 TTGAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATGCCCTCAACTGCAGCGAAC 773080 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || || | | | || || | ||||| ||| |||||||| || |||||||| Sbjct 773081 GCAACAAGTCGTTGAGCAAAGGAGGAGTTCTGGTCGGAGATCCACTTCAGTGCCCAGTCG 773140 Query 48332 GCCTTCTT 48339 |||||||| Sbjct 773141 GCCTTCTT 773148 Score = 84.2 bits (92), Expect = 4e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 48462 ACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGAT 48521 |||| |||||| | ||||| | ||||||||| || ||||| ||||||||||| Sbjct 773380 ACCCATAGAAGCAGCGAGCCTCTGGGATCTGCACTTCGTTGCTGAATCGCTCCAGCAGAT 773439 Query 48522 TCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 |||| || || || ||||| || |||||||||||||| || ||||| Sbjct 773440 TCTCGTTCACGATACCATCGGAGGCAGCAAAGAAGGCGAGAACATG 773485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532473963520