Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 150 3e-31 >seq2 Length=3929205 Score = 150 bits (166), Expect = 3e-31 Identities = 551/846 (65%), Gaps = 20/846 (2%) Strand=Plus/Minus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || |||||| || || || ||||||| || | || || || | | || || || Sbjct 1716387 CTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTC 1716328 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 ||||| ||| ||||||| | |||||| || || | || || ||||| |||||||| Sbjct 1716327 TTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAG 1716268 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG- 222215 |||| ||| | || || || |||||||||||||| || || | ||| | ||| | Sbjct 1716267 GTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGA-CATAACGTGCAGTGT 1716209 Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGT 222275 |||||||| | || | || | || || ||||| |||||||||||| ||||| Sbjct 1716208 TGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGT 1716149 Query 222276 ACGCACCGCCGGCCCTCAGGTTACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAG 222334 | | || ||| | | | | || ||| | || ||||| || ||| || ||| Sbjct 1716148 ATGAGCCAGTGGCACGAATG-CAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAG 1716090 Query 222335 ATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTC 222394 ||||| || ||| ||||||| || || ||||||||| || ||||||||| | || Sbjct 1716089 ATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCA 1716030 Query 222395 AGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTG 222454 | || ||| || || |||| || | | | | | || || ||||| || ||| Sbjct 1716029 ATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAA 1715970 Query 222455 GCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTG 222514 ||||| |||||| | | ||||||||||| ||| ||||| | | | | ||| || Sbjct 1715969 GCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCA 1715910 Query 222515 TCCCCGTGAAT--CTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC 222572 || || ||||| | || | | || | ||| |||||| || || | || || Sbjct 1715909 TCGCCATGAATACCAACA-GACACA-CGCATCAACATGTGTTGTGGTCGTTCAGCAACTT 1715852 Query 222573 CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGT 222632 ||| | | ||||| ||| ||| | |||| |||||||| |||||||| | | || Sbjct 1715851 GTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCCAAAGTATTGGTAGT 1715792 Query 222633 CAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGACTTGTGCTTTACGCTCAA 222690 ||||||| | | | || | ||| | || ||||| || | |||||| | | | Sbjct 1715791 TGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATCGGC--GTGCTTCATGACACA 1715734 Query 222691 CTCGAAAAAGCGCTCAGACACGAGGGGAG--CGTTCTCTTTGG-TGTCGGGGTTAACGTT 222747 |||| || | || | | ||||| ||| ||||| | | |||||| |||| Sbjct 1715733 CTCGTAAGTCTCTTTCGAGATCATGGGAGAAGGTT---TTTGGTTCTTGGGGTTGACGTA 1715677 Query 222748 GTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCG 222806 ||||| || | | || || |||||| || || | ||||||||||| || || | Sbjct 1715676 ATGGTAGAGATCTGAGATTACAGACGAGAACTGTTTCTTG-GTCTGCTTGTGGAGGTTGG 1715618 Query 222807 ACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGTCATGCTGGCTA 222866 | || || || |||| ||||| || ||||||| || || | ||||||| ||| Sbjct 1715617 AAACAGCAATACGAGCCGCCAGTATGGCATAGTCGGGATGTGTGACGGTCATGTATGCTG 1715558 Query 222867 GGGTCT 222872 ||||| Sbjct 1715557 CGGTCT 1715552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844474904320