Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=6183525 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || |||| || || || ||||| || ||||| || | | Sbjct 607358 ATGCAGATCTTTGTCAAGACATTAACTGGAAAGACGATTACACTGGAAGTTGAGTCATCG 607299 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||||||||| || || || || || || || Sbjct 607298 GATACCATCGACAACGTCAAGAGCAAA-ATCCAAGACAAGGAGGGCATCCCACCTGACCA 607240 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || |||||| |||||||| | | | || || || || Sbjct 607239 ACAGCGATTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGCACGCTCTCTGACTACAA 607180 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||| || |||||||||||| || || | || || || Sbjct 607179 CATCCAGAAGGAAAGCACTCTACACTTGGTGCTGAGACTTCGTGGCGG 607132 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || ||||| || || || || ||||| || ||| | | Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| ||||| || || || |||||||| |||||||| || Sbjct 607754 GATACCATCGACAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAG 607695 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || || || || || ||| | | | | ||||| || ||| Sbjct 607694 CAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAAC 607635 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||||||||| || ||| Sbjct 607634 ATTCAGAAGGAATCGACCCTTCAC 607611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897442535840