Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-22 seq3 102 1e-15 seq1 102 1e-15 seq8 98.7 2e-14 seq4 93.3 7e-13 >seq2 Length=3929205 Score = 125 bits (138), Expect = 1e-22 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| || || |||| ||| ||||| | |||||||| | ||||| ||||| Sbjct 1716230 TGGTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAG 1716171 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||||||||| || | ||| | ||| | ||| || | ||| || | || Sbjct 1716170 GTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGACCA 1716111 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | ||||||||| | || || | || || || |||||||||||||| Sbjct 1716110 ATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCA 1716051 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | || |||||| || || ||| || | | ||| || Sbjct 1716050 ATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCA 1715991 Query 2073781 GCATTGAAGAGCGTGGG 2073797 |||||||| || || || Sbjct 1715990 GCATTGAACAGGGTAGG 1715974 Score = 86.0 bits (94), Expect = 1e-10 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 ||||||||| |||| || || || || || ||| || || |||||||||||||| || Sbjct 1716368 GTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTC 1716309 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995 | || | |||||| || || || ||||| |||||||||||| ||| ||||| || Sbjct 1716308 AAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCT 1716249 Query 2071996 TTGCGCTTGCCGCCGCC 2072012 ||||||| ||| || Sbjct 1716248 GGGCGCTTGTTGCCACC 1716232 >seq3 Length=3924744 Score = 102 bits (112), Expect = 1e-15 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || || || || |||| ||| |||| |||| || || | Sbjct 3343439 TGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGACAGGCCCGAGGCCAGCTCTCGAT 3343498 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGC-CACGAGGTCTGCCA 2175192 ||| |||||||||||||||||| ||||| |||||| || |||| || ||||| |||| Sbjct 3343499 GCAGCTGGCTCTCGGTGGTGCGGGCGCCGACGGCG-CCGACGCTCAGCAGGTCAGCCA 3343555 >seq1 Length=6183525 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| ||||| || ||||||||| | | ||||| | ||||| ||||| || |||||| Sbjct 2770533 GCCGCAAACTATCTTGACATCAAGGCTTTGCTCGACGTTGGGTGTAAGACGGTCGCCAAC 2770592 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| |||||||| ||||| || || || |||||| || Sbjct 2770593 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGGAAAACATTCAACATCCAG 2770643 >seq8 Length=2671506 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| || ||||| ||||||||| |||| ||||| || ||| Sbjct 556014 GTACTTGGTGACGGCCTTGGTGCCTTCTGACACGGCGTGCTTGGCAAGTTCACCAGGCAG 555955 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || | |||| |||||||||||| |||| Sbjct 555954 GATGAGTCTGACGGAGGTCTGGATCTCTCGGG 555923 >seq4 Length=3791951 Score = 93.3 bits (102), Expect = 7e-13 Identities = 317/478 (66%), Gaps = 16/478 (3%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 |||| |||||||||||||||||||||| ||| || ||||| |||||||| | | ||| Sbjct 1850448 GCAAGGGCAAAGATCTTGCGCTGGTCGACCCCACCGAACTGAGCGTCGACCTTCAAGTGT 1850389 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCG-GGTTGCGG 2411619 | ||||| || ||||||||||| ||||| | || | | | ||||| | || | Sbjct 1850388 TCTTCGTCAAGTGCCTGCATGAGAGGGTAAATAAG--TCCAGATAGCGGTGCATTTTCAC 1850331 Query 2411620 TCCATCTTGACCACCTGGGCGGCGGC-CT-TTTGCGCCGTGCCGACGGTCACGCGCGCCG 2411677 || | ||||| || | ||| | || || || ||| ||||| | || || | | | | Sbjct 1850330 TCTGT-TTGACGACTTCAGCGCCTGCTCTCTTCGCGTCGTGC--TCAGTGAC-CACACTG 1850275 Query 2411678 -TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACA 2411736 |||| || || | ||| | |||||| | | || |||||| ||| | ||| Sbjct 1850274 CTCAGTCGGAATACGTCCATCGTGTAATCAGAGCTCAACTGGTAGGACGAGCCAAGGACA 1850215 Query 2411737 AATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCG 2411796 || || || ||||| ||||| | | || ||| | || |||| | |||| | Sbjct 1850214 AACTCCAGCTTTTCCAGACTCACGCCGACGGCCTTGAGAAGGGAAGAGATGACGAACTTG 1850155 Query 2411797 TACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGC 2411855 || | |||| |||| || ||| || || || | |||| ||||||||| | Sbjct 1850154 TAGTACTCGGC-GCGGTACTTGACCAGCTCGATAGGTGCCTTGAGATTGTCGAGAAACCC 1850096 Query 2411856 GTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTT 2411915 || | |||||| | || ||| | || ||||||| || | ||||||| || | || Sbjct 1850095 ATGGATGTCGGCCAGAAGAATCTTGACGTGACATCCCGCTCGCAGAAAGTGCGCAATCTT 1850036 Query 2411916 AAAGATGGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATA 2411972 | ||||||||||| || || ||| || ||| |||| || | || || ||||| || Sbjct 1850035 CATCATGGGCACAAAATAACCGCAG-TGAGGCCTGCCGGTGGTGGCTGTTCCCCAGTA 1849979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243421512292