Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 seq8 107 1e-18 seq4 98.7 6e-16 >seq1 Length=6183525 Score = 113 bits (124), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| ||| | ||||| |||||||| ||||| ||||| || || |||| || Sbjct 607144 CTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCA 607203 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| || || || || ||||||| ||| || ||||| | || | ||||||||| Sbjct 607204 TCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCCTCCTTG 607263 Query 34883 TCGTTTATTTTTTGTTTGACG-----GATGCTAT-CGATTCATTGGCCTCGACATCAACG 34936 || | ||||| |||||| |||| ||| |||| | ||| || || | Sbjct 607264 TCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGAT------GACTCAACTTCCAGT 607317 Query 34937 GTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| || | ||||| |||||||||||||| Sbjct 607318 GTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || || |||||||| || || | ||| |||||||| ||||| ||||| || Sbjct 607360 CCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAA 607419 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || | || || | |||||| || |||||||||| ||||||||||| | || Sbjct 607420 AGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGG 607479 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| | ||||| Sbjct 607480 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACT 607539 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 607540 TCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| |||||||||||||| ||||| || ||| | || |||| Sbjct 607603 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCT 607662 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || || ||||||| ||||||||||| | || | || ||||| || Sbjct 607663 TCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCC 607722 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | || || || | ||| || Sbjct 607723 TGAATCTTGCTCTTTAC--AT--TGTCGATGGTATCAGACGATTCAACCTCGAGGGTGAT 607778 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || ||||||||||| || || || ||||| Sbjct 607779 GGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||| ||||| ||||| ||||| ||| |||| | || Sbjct 607831 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCT 607890 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| |||||||| || || |||||||| | || | || |||||||| Sbjct 607891 TCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 607950 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || ||| ||||| |||| ||| |||||| Sbjct 607951 TGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 608010 Query 34946 TTTCCCGTGA 34955 ||||| |||| Sbjct 608011 TTTCCGGTGA 608020 >seq8 Length=2671506 Score = 107 bits (118), Expect = 1e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| ||||| || || |||| | || Sbjct 921305 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 921246 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||||||||||||||||||||| ||||||||||| | || | || |||||||| Sbjct 921245 TCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGAATTCCTTCCTTGTC 921187 >seq4 Length=3791951 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/190 (72%), Gaps = 8/190 (4%) Strand=Plus/Plus Query 34784 CTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCG 34843 ||| ||||||||||||| ||||| || | || | || || ||||||||||||||| Sbjct 1156130 CTCACCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCG 1156189 Query 34844 AAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG 34903 ||||||| |||||||||||| | || | || |||||||| | || || ||||| Sbjct 1156190 AAGATCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGAC- 1156248 Query 34904 GATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGT 34959 || | ||||| || | ||| || || | ||| || ||||| ||||||||||| Sbjct 1156249 -AT--TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGT 1156305 Query 34960 CTTTACAAAG 34969 ||| || ||| Sbjct 1156306 CTTGACGAAG 1156315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692688857332