Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 147 4e-30 >seq1 Length=6183525 Score = 147 bits (162), Expect = 4e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| || | ||| || | || ||||| ||||| ||||| || || || || | Sbjct 607358 TACCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTG 607417 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| ||||||||||| ||| || || || ||||| | | ||| || || || | Sbjct 607418 AAAGAGTTCGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTG 607477 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| ||||||||| ||||| || || || ||||| || ||| | ||| Sbjct 607478 GGATACCCTCCTTGTCTTGAATC-TTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCG 607536 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | || || || || ||||||| |||||| ||||| || ||||| Sbjct 607537 ACTTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 138 bits (152), Expect = 2e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | ||| || || | ||| || || ||||| ||||| || || || || | Sbjct 607586 TACCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTG 607645 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| ||||| || || |||||||| | | ||| || || |||| Sbjct 607646 AGAGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAG 607705 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | |||||||||||||| |||||| ||||| |||||||| || || |||||| | ||| Sbjct 607706 GAATTCCTTCCTTATCCTGAATC-TTGCTCTTTACATTGTCGATGGTATCAGACGATTCA 607764 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || |||||||| || | ||||| || || || ||||| Sbjct 607765 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 100 bits (110), Expect = 6e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || || || || |||||||| || || || || Sbjct 607814 TACCGCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGC 607873 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | |||||||| ||||| |||||||| ||||| || | || || || |||| Sbjct 607874 TCAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAG 607933 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| || |||||||| | || || || ||||| ||||| | | ||| | Sbjct 607934 GAATTCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGA 607993 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || || ||||| || || Sbjct 607994 CCTCAAGGGTGATGGTCTTTCCGGT 608018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826847769492