Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 212 6e-50 seq1 104 2e-17 seq4 100 3e-16 >seq2 Length=3929205 Score = 212 bits (234), Expect = 6e-50 Identities = 1113/1751 (64%), Gaps = 47/1751 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT-CA-ATGAGT-CGCTTT 148109 ||||| ||| || ||||| || |||||||| || ||||| | || | ||| |||| Sbjct 1717490 GACTGAGACTGATCGATGAAGGCACCACGGTCGGCAGCCATCTGCAGAACAGTACGCTGA 1717431 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | || |||||| | ||||||||||| ||| || | ||| || ||| ||| Sbjct 1717430 CTG---ATTTCCCAGACGGTCTTGTACAGAGCCTTAATGTCATCAGGGATGTTTGGAATG 1717374 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | ||| || | | |||| || | || ||| | ||| | | || Sbjct 1717373 TTCTGAATCGATCCACCCTCGGCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCC 1717314 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || || || || || || || || | ||| Sbjct 1717313 AGGTCGACCAGGTCCTTCAGCAGCCATGGGTTGACAACTTGGAATTCACCAGCCAACACA 1717254 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || ||| | ||| || | || ||||| | |||||||| ||||| ||||| Sbjct 1717253 CGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGATCTGG 1717194 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||||| ||| || |||||| || || ||||| ||||| || | |||| | || Sbjct 1717193 GAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGGAGTTCCGGACACCGTGCTTAGCA 1717134 Query 148410 ATTT-TGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468 || | ||| |||||| ||||||||||||| || || || || ||||||||||| Sbjct 1717133 ATCTCTGC-CTTCAGGCTATCCCAGTCCCAGAGGTCGGAAGGAGTGACATTCCACATGTC 1717075 Query 148469 GTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 || || || ||||| | | ||||||||||| |||| || | || || | Sbjct 1717074 ATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTCATACGTTTCATAGGTGCCTTGTTC 1717015 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | || || || || || | ||| ||| ||||| |||||| || || | Sbjct 1717014 CTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTGATAAATGGTCTCGAAGATCTGAAT 1716955 Query 148589 GTTGAGCAGCGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 ||||||| | | | | || | ||| | || | ||| || | || || || | Sbjct 1716954 GTTGAGCTGT-CTGGCTTCTGGAGAGTCGAATGGTAGACGTAGTGCGAGGAAAGCATCCG 1716896 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | || || || || || | |||| || || ||| | |||||| || ||| Sbjct 1716895 CCAGACCTTGAACACCAAGACCAACAGGTCGATGTCTCATGTTGCTCTTCTTTGC-CTCG 1716837 Query 148708 CG-AGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 | | ||| |||| |||| ||| |||||||||| || || || || || | ||| Sbjct 1716836 GGTACCGGGTAGTAGTTGACGTCAATGATCTTGTTTAGGTTTCGAGTGACTACTTGGGTA 1716777 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT----CTA--CGATGCA--TCGGTTCA 148818 | | |||| | || || |||| | || || ||| | | |||| || Sbjct 1716776 ACCTCGTGCAGGCGACCGAAGTCATACTCGCCAGTAGACTGATCGACGAAAGTCGG--CA 1716719 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 || | ||||| |||||||| || ||| |||||| |||| || |||| || |||| Sbjct 1716718 GTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCT 1716659 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 | | ||||| || || | || ||||| |||||| || |||||||| ||||| Sbjct 1716658 CCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGC 1716599 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACC 148998 | || ||||||||||| ||||| ||| || || || ||| | || | || | | Sbjct 1716598 ATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAAT-AGCA 1716540 Query 148999 GATG-CAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCC--TCCTGCT----CGTAT 149051 | ||| | ||| || |||| || | |||||| |||| || ||||| Sbjct 1716539 TACCACAGCTTCTGAGC-----CTTGACAGTC-TGGCGACCACGTCCTTCTTTTTCGTAT 1716486 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGC 149111 ||| || ||||||| ||||| ||| ||| | |||||||| || || Sbjct 1716485 TTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCATGA 1716426 Query 149112 GGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACC 149171 ||||| | ||| | ||| | || | || |||||||| || ||||| || | Sbjct 1716425 GGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGAGTC 1716366 Query 149172 CAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGG 149231 || || ||||| | ||||| || || | ||||| ||| ||| | || | Sbjct 1716365 CACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAG 1716306 Query 149232 TTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTG 149291 || | | | ||| | ||||| ||||| ||||| | ||| | |||| || || | Sbjct 1716305 TTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGG 1716246 Query 149292 CGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGT 149348 |||||| || || |||||||| | || | ||||||| || |||| | ||| || Sbjct 1716245 CGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGG 1716186 Query 149349 TCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTA---ATGCGACTGCCGCGCGCTCGCAC 149404 | |||| ||| || ||||| || ||| | ||| | | | || || ||| Sbjct 1716185 ATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAG 1716126 Query 149405 TTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAG 149464 | | ||| |||| || || ||||| || ||| ||||| || ||| ||| Sbjct 1716125 T--GAGCA--TTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAG 1716070 Query 149465 CGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACAT 149524 || |||||||||||| |||||||| ||||||| | || |||||| || ||| Sbjct 1716069 TGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAG 1716010 Query 149525 TTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTG 149584 ||| || | |||| || || ||||| ||| || ||||| ||||| | ||||| Sbjct 1716009 TTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTG 1715950 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 ||||| | ||| | ||||| | || | |||||||||||| || || | | Sbjct 1715949 AGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCATCGCCATGAATACCAACAGA 1715890 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 || ||||||| ||| || || ||||| || || |||| || || || ||||||||||| Sbjct 1715889 CACACGCATCAACATGTGTTGTGGTCGTTCAGCAACTTGTTTGCCGATCTTGAGCAAGTA 1715830 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAAT 149764 | || | |||||| |||||||||| | ||||| ||||| ||| | | |||| Sbjct 1715829 TGATCTCTCCAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAAT 1715770 Query 149765 GGCGGCGTCGA 149775 ||| | || || Sbjct 1715769 GGCCGAGTTGA 1715759 >seq1 Length=6183525 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||||||||| || ||||| |||| || ||| ||| || || || Sbjct 607839 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCAAGTTG 607898 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| | || || ||||||||||| ||||| || ||||||||||| ||||| Sbjct 607899 CTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTT 607958 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| || ||| ||| || || || | ||||| ||| || ||||| Sbjct 607959 GGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 608018 >seq4 Length=3791951 Score = 100 bits (110), Expect = 3e-16 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| || ||||| |||| | || || || |||||||| ||||| || ||| | | Sbjct 1156136 TTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCG--TCCTCGAGTTGCTTTCCGGCGAAGA 1156193 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | || |||||||| || ||||||||||||||||| |||||| ||||| | | Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 1156253 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | ||||||| | |||||| |||| ||||| || ||||| || || || || |||| Sbjct 1156254 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1156313 Query 133651 A 133651 | Sbjct 1156314 A 1156314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420630802720