Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 136 9e-27 >seq2 Length=3929205 Score = 136 bits (150), Expect = 9e-27 Identities = 420/644 (65%), Gaps = 7/644 (1%) Strand=Plus/Plus Query 110363 TGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAA 110422 |||||| || ||||||||||| | ||||| | ||||||||||||| |||| | | Sbjct 1715859 TGAACGACCACAACACATGTTGATGCGTGTGTCTGTTGGTATTCATGGCGATGACGTCGA 1715918 Query 110423 AGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482 | || || ||| || | | | | ||| || ||| ||| ||||||| Sbjct 1715919 GAAGGCCATCGAGACTTACAATCTGATGTCTCAGAAGTGCTTTACTCACGCTTCTCCTAC 1715978 Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542 ||| || || || ||||| | ||| || |||| |||||| | | | || || Sbjct 1715979 CCTGTTCAATGCTGGAACGCCTCAGCCCCAACTGTCTTCATGCTTTTTGATTGACATGAA 1716038 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 || || ||||| || || || ||| | || || |||| | || || || | Sbjct 1716039 GGAGGACAGCATTGAGGGCATCTACGATACACTCAAGACCTGTGCTATGATCTCCAAGAC 1716098 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 | |||| || |||||| | | | ||| ||||| | | || || | || || Sbjct 1716099 CGCTGGCGGTATTGGTCTCAATGCTCACTGCATTCGTGCCACTGGCTCATACATTGCTGG 1716158 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || ||| | || | ||| || | || ||| |||||||||||||| |||||||| Sbjct 1716159 CACCAACGGTACCTCCAATGGCCTCATCCCCATGCTAAGAGTCTTCAACAACACTGCACG 1716218 Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 ||||| | |||||||| || | | || | || || ||||| || || || || Sbjct 1716219 TTATGTCGACCAAGGTGGCAACAAGCGCCCAGGTGCCTTCGCCATCTACCTGGAGCCATG 1716278 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTC-GTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| | ||| | || || || || |||||| | || || || || |||||| Sbjct 1716279 GCATGCGGATGTCTTCGACTTTTT-GAACTTGAGGAAGAACCACGGCAAAGAAGAAGTCC 1716337 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 | || ||||| |||| || || |||||| | | ||| | |||||||| |||||| | Sbjct 1716338 GTGCTCGTGACCTATTCTACGCCCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGA 1716397 Query 110899 AAAATG-GCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 |||| | || ||| | || | || |||||| |||| ||||| ||||||| ||| Sbjct 1716398 AAAACCAGGAT-TGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTGATGTCTAT 1716456 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 || || |||| || | || || || ||||| ||||||||||| Sbjct 1716457 GGCGAAAAGTTCGAGGCTCTCTATGAGAAATACGAAAAAGAAGG 1716500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812374230908