Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 105 2e-17 seq2 86.0 1e-11 >seq1 Length=6183525 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| ||||| ||||||||||| ||||| | ||||| ||| |||||| Sbjct 607583 CAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCTGAC 607524 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || || || || |||||| ||| Sbjct 607523 ACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAGCAA 607464 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || ||||| || ||||| || | ||| | | || |||||| || Sbjct 607463 CGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAACATC 607404 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || || ||||| || || || ||||| Sbjct 607403 CAGAAGGAATCCACTCTCCATCTCGTCCTGAGA 607371 Score = 87.8 bits (96), Expect = 4e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| | || || ||| ||||| || |||| Sbjct 607800 CAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCTGATACCATCGACAA 607741 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| |||||||| || || ||||||||| || ||| ||| | | ||||| Sbjct 607740 TGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAGCAACGCTTGATCTT 607681 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | |||||||| | || | | || |||||| | ||||| || || Sbjct 607680 TGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAACATTCAGAAGGAATC 607621 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||||||||| | | |||||| Sbjct 607620 GACCCTTCACCTTGTCCTCCGTCTTCGA 607593 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||||||| || ||| || | ||||||||||| |||||| Sbjct 607958 AAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGAAAG 607899 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | ||||| || | || || ||| |||||| ||||||||||||| || || || Sbjct 607898 CAACTTGAAGACGGCCGCACCCTGAGCGACTACAACATCCAGAAAGAGTCCACCCTCCAT 607839 Query 206374 CTTGT 206378 ||||| Sbjct 607838 CTTGT 607834 >seq2 Length=3929205 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 173202 TCCTTCTTTTTCGTATCTCTCATAGAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAG 173261 |||||||||||||||| |||||||||| | ||||| | | || || | || |||| Sbjct 1716501 TCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAG 1716442 Query 173262 ACCGGGAGCTTCCTTCGGACAAAAGAGACTCCAATTTCCATCGGTCTCGACCCTCTTCAT 173321 ||||||||| || | || || ||||| |||||| | |||| || | |||||| Sbjct 1716441 ACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTTCAT 1716382 Query 173322 GAAGAGGTCGGAAGTCCAAATCGCGTAGAA 173351 ||| || || | |||||| | |||||||| Sbjct 1716381 GAAAAGATCAGGAGTCCACAGGGCGTAGAA 1716352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820376021788