Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 170 2e-37 >seq2 Length=3929205 Score = 170 bits (188), Expect = 2e-37 Identities = 967/1531 (63%), Gaps = 27/1531 (2%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| ||||| || || || |||| |||||||| |||| || | || ||| | || Sbjct 1717283 TTGACAACTTGGAATTCACCAGCCAACACACGTC-GAGAATAGATGTTCGATGTGTATGG 1717225 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 |||||| | || || || || || || |||| || | ||| ||||||||| || || Sbjct 1717224 CTCAAAGCATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAAC 1717165 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 | || || || || | ||||| | | || | |||||| | | ||||||||| Sbjct 1717164 TAGCAGGGAGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCA 1717105 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 | ||| || || || || ||||||||||| || || || | ||| | | | || Sbjct 1717104 GAGGTCG--GAAGGAGTGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGG 1717047 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| | |||| ||| | || | || || | ||||| || | Sbjct 1717046 CTGCCCTCATACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAAT 1716987 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTC--GCTTCTTCGCTCT 147247 || | | || ||||| ||| ||| || |||| || | ||| |||||| | Sbjct 1716986 GCGGCGTGATAAATGGTCTCGAAGATCTGAATGTTGAG--CTGTCTGGCTTCTGGAGAGT 1716929 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 || | || | ||| || | || ||||| |||| ||| || | ||| | || | || Sbjct 1716928 CGAATGGTAGACGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAG 1716869 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGC-TATGGGATAGTGGTTGCGATCAATA 147366 ||||||| | |||||| ||| || |||| || || |||| |||| ||||| Sbjct 1716868 GTCGATGTCTCATGTTGCTCTTCTTTGC-CTCGGGTACCGGGTAGTAGTTGACGTCAATG 1716810 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAA 147426 |||||||| ||||| || || |||| || | | || |||| ||||| Sbjct 1716809 ATCTTGTTTAGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATA- 1716751 Query 147427 GTCCCGTCT-TCGACACGT--ACGCA--TTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 | || | | ||| | ||| | | || || || | || || |||||||||| Sbjct 1716750 --CTCGCCAGTAGACTGATCGACGAAAGTCGG--CAGTGCCAGCGAGGCAAGATTGCAGA 1716695 Query 147482 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTA 147541 | ||| ||| || | | || ||| || || || | ||||| ||| || | | Sbjct 1716694 CAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAA 1716635 Query 147542 TGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACG 147601 || ||||| || | ||| ||||| ||| ||||| || || ||| | || ||||| | Sbjct 1716634 TGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAG 1716575 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAGGTCCTGCGCTCGCACC 147660 || |||||||| || | |||| ||| | || ||| | ||| || || Sbjct 1716574 GTGTACCGGTCTCAGTCTGAGCCTCAAGAATAG-CATACCACAGCTTCTGAGCCTTGACA 1716516 Query 147661 CGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCG 147720 ||| ||| || || || |||||||| ||| || | ||| |||| ||||| Sbjct 1716515 GTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCA 1716456 Query 147721 TAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780 ||| ||| ||||| |||||| || ||| || || | || | ||| | || Sbjct 1716455 TAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTC 1716396 Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840 | ||| || ||| || ||||| || |||||| ||||| | || || || || | Sbjct 1716395 TCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGG 1716336 Query 147841 CAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAG 147900 || || ||| ||| |||| || | | | ||| || || ||||| Sbjct 1716335 ACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCAT 1716276 Query 147901 GGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGC 147957 || || | ||||| ||| | |||||| ||||| || || |||||||||| || Sbjct 1716275 GGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACGT 1716216 Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017 | ||||||| || || | | |||||| ||||| | | || ||||||||| | Sbjct 1716215 GCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCA 1716156 Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTAC 148077 || | ||| ||| || | ||| | || | ||||| ||||| || | Sbjct 1716155 GCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGTC 1716096 Query 148078 TTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTG 148137 || || || ||| || | ||| ||||||||| || |||||||| | || Sbjct 1716095 TTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTC 1716036 Query 148138 ACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTG 148197 | | ||| |||||| || ||| ||| ||| || ||||||| || ||| ||||| Sbjct 1716035 ATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTA 1715976 Query 148198 GGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCG 148257 ||| ||||| ||||| | || ||| ||||| || ||||| || || | ||| Sbjct 1715975 GGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCG 1715916 Query 148258 ATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCA 148317 | ||| ||||| ||||| || | | || ||||| | |||||| ||||||||||| ||| Sbjct 1715915 ACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGTCGTTCAGCA 1715856 Query 148318 ACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTG 148377 ||||| ||| ||||||||| | ||| | || | || ||| | |||||||| | | Sbjct 1715855 ACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCCAAAGTATTGG 1715796 Query 148378 TAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 || | || ||| | || || | ||||||| Sbjct 1715795 TAGTTGAAGTCTCGGTCATATACAATGGCCG 1715765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611033186080