Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 116 5e-20 seq3 111 2e-18 >seq2 Length=3929205 Score = 116 bits (128), Expect = 5e-20 Identities = 200/288 (69%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| || || ||| || | || || || || ||||| || ||||| | Sbjct 1715944 ATGTCTCAGAAGTGCTTTAC-TCACGCTTCTCCTACCCTGTTCAATGCTGGAACGCCTCA 1716002 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || || || || |||||| || | |||||||||| || || ||||||||||| Sbjct 1716003 GCCCCAACTGTCTTCATGCTTTTTGATTGACATGAAGGAGGACAGCATTGAGGGCATCTA 1716062 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 || || |||||| || || | ||||||||| | || ||||| || ||| | || Sbjct 1716063 CGATACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCAATGC 1716122 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | || ||| | ||| | ||| | || ||||||||||| ||||| ||||| Sbjct 1716123 TCACTGCATTCGTGCCACTGGCTCATACATTGCTGGCACCAACGGTACCTCCAATGGCCT 1716182 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 | |||||||| | || || ||| |||| || || || |||||||| Sbjct 1716183 CATCCCCATGCTAAGAGTCTTCAACAACACTGCACGTTATGTCGACCA 1716230 >seq3 Length=3924744 Score = 111 bits (122), Expect = 2e-18 Identities = 113/142 (80%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 165748 TGGCAGACCTGGTCA-CGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCAC 165806 |||| |||||| | | ||| || ||||||||| || |||||||||||||||||| |||| Sbjct 3343555 TGGCTGACCTGCTGAGCGTCGG-CGCCGTCGGCGCCCGCACCACCGAGAGCCAGCTGCAT 3343497 Query 165807 CGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA-G 165865 || ||| |||| |||| ||| || | ||| | |||||||| ||| |||||||||||| | Sbjct 3343496 CGAGAGCTGGCCTCGGGCCTGTCGTTCCCCGTGGGCTTCAAGAACGGCACCGACGGCACG 3343437 Query 165866 CGTGGCGACGGCCCTCGATGCC 165887 | |||| | ||| |||| ||| Sbjct 3343436 CTGGGCGTC-GCCATCGACGCC 3343416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808499348536