Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 >seq2 Length=3929205 Score = 93.3 bits (102), Expect = 4e-14 Identities = 252/385 (65%), Gaps = 3/385 (1%) Strand=Plus/Minus Query 131645 TCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTT 131704 ||||| |||||||| || | ||| || ||| | ||||| || || || | ||| Sbjct 1716395 TCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGG 1716336 Query 131705 TTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAG 131764 |||||| | || | || |||| || |||||||| || | ||||||||||| Sbjct 1716335 ACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCAT 1716276 Query 131765 GGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGA 131821 || |||| || | || | || ||| |||| || || ||||| | |||| ||| Sbjct 1716275 GGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACATAACGT 1716216 Query 131822 ACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTC 131881 | |||||||| | || | | |||||| | || |||| | | || ||||||| Sbjct 1716215 GCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCA 1716156 Query 131882 TTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTAT 131941 |||||| |||| |||| | || |||| | ||||| |||||||| || || Sbjct 1716155 GCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGTC 1716096 Query 131942 TTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCA 132001 || ||||| | || || | | || || | ||||| || || | ||||||| | Sbjct 1716095 TTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTC 1716036 Query 132002 ATGTCGACTAAAAAGCAAGAGGACA 132026 ||||| | |||||||| || |||| Sbjct 1716035 ATGTCAATCAAAAAGCATGAAGACA 1716011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934254991136