Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 217 2e-51 >seq2 Length=3929205 Score = 217 bits (240), Expect = 2e-51 Identities = 1130/1781 (63%), Gaps = 53/1781 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| ||| ||| ||| | | ||||||||||||||| || ||||| | | Sbjct 1717621 TGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCCAGTCTTCAAGC 1717562 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGA-CTTTCC-AT 110448 | ||||| || | ||||| || | || ||| ||| ||||| |||| || Sbjct 1717561 CCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCATGGTTGGCTCTTTGAGAT 1717502 Query 110449 GAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCA 110506 ||| ||| | ||| |||| | || |||||| || || | || ||||| | Sbjct 1717501 GAAT--GTTGAGTGACTGAGACT--GATCGATGAAGGCACCACGGTCGGCAGCCATCTGC 1717446 Query 110507 ATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGG 110566 | ||| | | |||||||| || || || ||| ||| || ||||| ||| Sbjct 1717445 AGAACAGTACGCTGACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGTCATCAGGG 1717386 Query 110567 ATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626 || | || || ||||| || || || ||| | | || | | |||||||| | Sbjct 1717385 ATGTTTGGAATGTTCTGAATCGATCCACCCTCGGCAATGATACGGTTCTTCATATTGTCA 1717326 Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCA 110686 ||||||||||| | | ||||| || | || |||||||| || ||| Sbjct 1717325 GACCAGAGACCCAGGTCGACCAGGTCCTTCAGCAGCCATGGGTTGACAACTTGGAATTCA 1717266 Query 110687 CCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTA 110746 || || | | || |||||||| | ||||||||| ||||||||||| || ||| Sbjct 1717265 CCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAAGCATTCGTTGTTA 1717206 Query 110747 CCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGA 110806 |||||||| || | ||| || || || ||||| || || | | || ||| || | | Sbjct 1717205 CCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAGGGAGTTCCGGACA 1717146 Query 110807 CCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACC 110865 || | || || | |||| || ||||||||| || | | || | || Sbjct 1717145 CCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAGAGGTCGGAAGGAGTGACA 1717086 Query 110866 TTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATA 110925 |||| |||||||| | ||||| | ||||| || | || |||||| | |||||||| Sbjct 1717085 TTCC-ACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTCATACGTTTCATA 1717027 Query 110926 GGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC 110985 || ||||| | | || | ||||| || || | |||||||| ||||| || Sbjct 1717026 GGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTGATAAATGGTCTC 1716967 Query 110986 AAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCAC 111040 ||||| || || | || ||||||| || || |||| ||||| | | Sbjct 1716966 GAAGATCTGAATGTTGAGCTGTCTGGCTTCTGGAGAGTCGAATGGTAGACGTAGTGCGAG 1716907 Query 111041 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 111100 ||| ||||||| |||||||||||||| | ||||| ||||| |||| ||| || Sbjct 1716906 GAAAG-----CATCCGCCAGACCTTGAACACCAAGACCAACAGGTCGATGTCTCATGTTG 1716852 Query 111101 GACTT--TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158 ||| | || | | || || || | || |||||||| |||||| ||| Sbjct 1716851 CTCTTCTTTGCCTCGGGT--ACCGGGTAGTAGTTGACGTCAATGATCTTGTTTAGGTTTC 1716794 Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218 || || | | || | || || || | | ||| | || ||| | || Sbjct 1716793 GAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATACTCGCCAGTAGACTGAT 1716734 Query 111219 TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG 111278 ||| | | || || || | || || | |||||| |||||| |||||| | Sbjct 1716733 CGACGAAAGTCGGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCATCAGGGGAAG 1716674 Query 111279 TGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 111338 || |||| | ||| || || || ||||| || || ||| || ||||| ||||| |||| Sbjct 1716673 TGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGT 1716614 Query 111339 TACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398 | ||||||| |||||| ||||||||||| || ||||| || || || ||||| ||||| | Sbjct 1716613 TGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAG 1716554 Query 111399 ATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACA--ATGGCGTTGGCCCGTCCCT 111455 | |||||||| | ||| | | || | | || | ||| ||||| | ||||| | Sbjct 1716553 CCTCAAGAATAGCATACCACAGCTTCTGAGCCTTG-ACAGTCTGGCG--ACCACGTCCTT 1716497 Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515 | ||||| || ||||| || || |||| || || | || | ||||| | Sbjct 1716496 CTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAGCAAGACCGG 1716437 Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575 | |||| | || ||||| || | ||| | || |||||| ||||||||||||| Sbjct 1716436 GAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCTTCATGAAAA 1716377 Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGG 111634 | || ||| ||||||||| | || || || | | ||| || | ||||| | || ||| Sbjct 1716376 GATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGA-CTTCTTCTTTGCCGTGG 1716318 Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694 || | || | | || || | || |||||| ||||||||||| || |||| ||| Sbjct 1716317 TTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGTAGATGGCG 1716258 Query 111695 ATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 111748 | | || | | ||| ||| |||| | ||||| || || ||| ||| || Sbjct 1716257 AAGGCACC---TGGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGTTGTTGAAG 1716201 Query 111749 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTA 111808 || | ||||| || || | |||| || ||| || || || ||| || | Sbjct 1716200 ACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGTATGAGCCA 1716141 Query 111809 TTGGCTCTCACATCATGGA-TGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTT 111863 |||| | ||| | || |||| |||||||| ||||| ||| ||||| Sbjct 1716140 GTGGCAC-----GAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCA 1716086 Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923 ||||| | | || || | ||||| || | || ||||||||| || | || | Sbjct 1716085 TAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAATCA 1716026 Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983 ||||| |||| || || || || ||||||||||| ||||| || | |||| Sbjct 1716025 AAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGT 1715966 Query 111984 GAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042 || | || || | || |||||| | ||| ||||| | | | || | ||| || Sbjct 1715965 GAGTAAAGCACTTC-TGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCATCG 1715907 Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || || | | || ||||| ||||||| ||||| Sbjct 1715906 CCATGAATACCAACAGACACACGCATCAACATGTGTTGTGG 1715866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031780188800