Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 244 1e-59 seq9 87.8 2e-12 seq7 87.8 2e-12 >seq2 Length=3929205 Score = 244 bits (270), Expect = 1e-59 Identities = 1144/1789 (64%), Gaps = 48/1789 (3%) Strand=Plus/Minus Query 117795 GGTTCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCC 117854 ||| || || |||||||||||||| | ||| | | |||||| |||||||| || Sbjct 1717630 GGTCCACGG-TGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCCA 1717572 Query 117855 GTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGA 117914 ||||| | ||| ||||||| | | ||||| || | | ||| | |||||| Sbjct 1717571 GTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCATGGTTGGC 1717512 Query 117915 -CTTTCC-ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCG 117972 |||| ||||| ||| | || || |||||||||||| || || || || | Sbjct 1717511 TCTTTGAGATGAAT--GTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAG 1717454 Query 117973 CCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATAT 118032 |||| | | ||| | |||||||||| || ||| |||| || |||||| | Sbjct 1717453 CCATCTGCAGAACAGTACGCTGACTGATTTCCCAGACGGTCTTGTACAGAGCCTTAATGT 1717394 Query 118033 CATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGA---TCCT 118089 |||| ||||| | || || || || ||||||||| | | | |||| | | || Sbjct 1717393 CATCAGGGATGTTTGGAATGTTCTGAATCGATCCACCCTC---GGCAATGATACGGTTCT 1717337 Query 118090 TCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGAC 118147 |||||| | ||||||||||| | | || |||| || || ||| | |||| Sbjct 1717336 TCATATTGTCAGACCAGAGACCCAGGTCGACCAGGTCCTTCAGCAGCCATGGGT--TGAC 1717279 Query 118148 AACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAA 118207 ||| || ||||| || | |||| |||||| || | |||||||||||||| Sbjct 1717278 AACTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGTTCGATGTGTATGGCTCAAA 1717219 Query 118208 GCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAG 118267 ||| || |||||||||||||| |||| || || || || |||||||| || | || || Sbjct 1717218 GCATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAGGCATGGGAGCAACTAGCAG 1717159 Query 118268 GCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAG 118327 | ||| |||| ||| | | ||| | |||| || |||||||| || | Sbjct 1717158 GGAGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGCTATCCCAGTCCCAGAGGTC 1717099 Query 118328 CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTC 118387 | | | |||||| ||| | || ||||| ||||| || |||| ||||| Sbjct 1717098 GGAAGGAGTGACATTCCACATGTCATATTGAAGGATGCCTTGTGAGACTGGGCTGCCCTC 1717039 Query 118388 AAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTG 118447 | | || ||||| | ||| | ||| || | || | || | || ||||| Sbjct 1717038 ATACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAAGAGGCTGTCAATGCGGCGTG 1716979 Query 118448 ATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGA 118506 ||| || || || || || || || | || || ||| || || || || | | Sbjct 1716978 ATAAATGGTCTCGAAGATCTGAATGTTGAGCTGTCT-GGCTTCTGGAGAGTCGAATGGTA 1716920 Query 118507 GTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTC 118566 | || | || ||||||| |||||||| ||||| || |||| || ||||||| Sbjct 1716919 GACGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCAAGACCAACAGGTCGATGTC 1716860 Query 118567 TCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTAT 118623 |||| || |||| || ||| || || || | || || || | | | | Sbjct 1716859 TCATGTTGCTCTTCTTTGC---CTCGGGTACCGGGTAGTAGTTGACGTCAATGATCTTGT 1716803 Query 118624 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 118683 |||| ||| ||||| || | || | || || || || | ||| | || || Sbjct 1716802 TTAGGTTTCGAGTGACTACTTGGGTAACCTCGTGCAGGCGACCGAAGTCATACTCGCCAG 1716743 Query 118684 TCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCAT 118743 | | || ||| | | || || || | || || ||||| || |||| ||||| Sbjct 1716742 TAGACTGATCGACGAAAGTCGGCAGTGCCAGCGAGGCAAGATTGCAGACAGCCACCTCAT 1716683 Query 118744 CCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGT 118803 | |||| |||| | ||| ||||||||||||||||| || |||||||||||||| Sbjct 1716682 CAGGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAGCTTCGAATGGTGCCCAAGT 1716623 Query 118804 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCT 118863 |||| || || ||| ||| || ||||||||||| || ||||| || || || |||| Sbjct 1716622 TCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGGATGTAAGGTGTACCGGTCT 1716563 Query 118864 CCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGC--TGGCACAGTGGCGTTGG 118920 | || || | || |||||||| | ||| | | || | ||| || || ||||| Sbjct 1716562 CAGTCTGAGCCTCAAGAATAGCATACCACAGCTTCTG-AGCCTTGACAGTCTGGCG--AC 1716506 Query 118921 CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 118980 | || || |||| ||||| || ||||| || || |||| ||| || | | || | Sbjct 1716505 CACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCGCCATAGACATCAG 1716446 Query 118981 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 119040 || || || |||| || ||||||||||| | ||| | | |||||| |||| Sbjct 1716445 CAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCAACACGCT 1716386 Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100 ||||||| || || || |||| || || |||| || || ||| || ||||||| | Sbjct 1716385 TCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGCACGGACTTCTTCTT 1716326 Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160 || || || | ||| | ||||||||| | || |||||| ||||| || ||||||| Sbjct 1716325 TGCCGTGGTTCTTCCTCAAGTTCAAAAAGTCGAAGACATCCGCATGCCATGGCTCCAGGT 1716266 Query 119161 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGG 119214 | | |||| | | ||| | || ||| | |||| ||||| | |||||| Sbjct 1716265 AGATGGCGA-AGGCACCT--GGGCGCTTGTTGCCACCTTGGTCGACATAACGTGCAGTGT 1716209 Query 119215 CGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--T 119272 ||| || || | ||||| || |||| |||| ||| || || || || || | Sbjct 1716208 TGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGGTGCCAGCAATGT 1716149 Query 119273 ACGAGACTTATTGGCTCTGA--CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTT 119330 | ||| | | |||| | | || | | || || | ||||||||| || || ||| Sbjct 1716148 ATGAGCC--AGTGGCACGAATGCAGTGAGCAT-TG-AGACCAATACCGCCAGCGGTCTTG 1716093 Query 119331 GAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTT 119390 ||||| || || | |||| | ||||||| || || || ||| |||| | Sbjct 1716092 GAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTCCTCCTTCATG 1716033 Query 119391 GCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGT 119450 | || | ||||| |||| ||| ||| || || ||||| ||||| || || || Sbjct 1716032 TCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAACAGGGTAGGA 1715973 Query 119451 GTCGCGTGGATGAA-CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAAT 119509 | ||||| | || || | || |||||| | ||| ||||| | | | | Sbjct 1715972 GAAGCGTGAGTAAAGCACTTC-TGAGACATCAGATTGTAAGTCTCGATGGCCTTCTCGAC 1715914 Query 119510 GTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 ||| || || |||||||| | || || ||||| ||||||| ||| ||| Sbjct 1715913 GTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGT 1715865 >seq9 Length=1825699 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/242 (69%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 179064 ATCTTTGCCACCCATGAGA-CGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATAT 179122 ||| ||||| ||| ||| ||||| ||||| || || | || | || ||||||| || Sbjct 1083680 ATCGTTGCCGCCC-TGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACAT 1083738 Query 179123 TGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCAC 179182 |||| || |||| | | | ||||||| ||| || || | | |||||| ||| | Sbjct 1083739 TGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCGC 1083798 Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCAT 179242 |||| |||||||| | | | | | || || || | || ||||||||||| || | Sbjct 1083799 CGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCCT 1083858 Query 179243 CCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGGCCGT 179302 ||| || || | ||| ||||| ||||| ||||||| ||| |||||| || || | Sbjct 1083859 TCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCAT 1083918 Query 179303 CG 179304 || Sbjct 1083919 CG 1083920 >seq7 Length=2764021 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 130092 TCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGA 130151 |||| | |||||| || | | |||||||||||||||||||| ||||| || |||| Sbjct 773019 TCTTGAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATGCCCTCAACTGCAGCGA 773078 Query 130152 ACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCAC 130210 |||||| || || | |||||||||| | | | || | | |||||||| ||||| Sbjct 773079 ACGCAACAAGTCGTTGAGCAAAGGAG-GAGTTCTGGTCGGAGATCCACTTCAGTGCCCAG 773137 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | ||||| || |||||||||| || | ||| || || || || | |||||| Sbjct 773138 TCGGCCTTCTTACGAATACACGGGATTGTATCGATAGCGTCGAAAAGGTAAGTCTTTTGC 773197 Query 130271 GATGGATCTTTGATGTACTT 130290 ||| |||||||| || || Sbjct 773198 TTTGGGTCTTTGATCTATTT 773217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434983547680