Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 239 1e-57 seq1 170 6e-37 seq8 91.5 4e-13 >seq2 Length=3929205 Score = 239 bits (264), Expect = 1e-57 Identities = 487/719 (68%), Gaps = 17/719 (2%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| ||||||| || || || ||||| | ||| | | |||| || | Sbjct 1850384 ATAGGTATCGATCTAGGTACAACCTACTCATGTGTGGGCATTTTCCGAGATGACCGCATC 1850325 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || || ||||| ||| ||||||| || |||| ||| || ||||| || Sbjct 1850324 GAAATCATTGCCAACGACCAAGGCAACCGAACAACCCCTTCATTCGTCGCCTTTACGGAC 1850265 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 ||||||||| |||| |||||| ||||||| || |||| || || || | || || Sbjct 1850264 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTCAGAACACA 1850205 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATC 349437 || || ||||| |||||||| || || ||| || | || || || || | Sbjct 1850204 GTCTTCGATGCCAAGCGACTGATCGGCCGAAAGTTCACGGATGCCGAAGTC----CAGGC 1850149 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 |||| | || || || || || | || | | | ||| |||| || ||| | || || Sbjct 1850148 TGATATGAAGCACTTCCCATTCAAGGTCAT-CGACAAG--GGTGGAAAGCCAGTCATCGA 1850092 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || || | || || || || || || |||||||||||| ||||| ||||| || Sbjct 1850091 AGTCGAGTTCAAGGGCGAGGTCAAGCACTTCACACCCGAAGAAATCTCATCCATGGTCTT 1850032 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || |||| || | || || | ||| | |||| || || | | || || || Sbjct 1850031 GACCAAGATGAGAGAGACAGCCGAGTCCTATCTCGGTGGCACTGTCAACAACGCAGTCAT 1849972 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||||| || || || || || || | || ||| || || || || ||||| ||| Sbjct 1849971 CACTGTCCCTGCATACTTCAACGACTCTCAACGTCAAGCCACCAAGGACGCTGGTCTCAT 1849912 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | || || || | || || || ||||| || || || || ||||| || || Sbjct 1849911 TGCCGGCCTCAACGTCCTCCGCATCATCAACGAACCTACCGCAGCTGCCATTGCCTACGG 1849852 Query 349738 GCTTGATAAAATG---AGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||||| || | | | || | || ||| | || || || ||| | ||||| || Sbjct 1849851 TCTTGACAAGAAGGCTACTGGC---GAGCGCAATGTCCTCATCTTCGATCTCGGTGGAGG 1849795 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || | |||||||| || || ||||| || | ||||| Sbjct 1849794 TACTTTCGATGTTTCCCTCCTGACCATCGAAGAGGGTATCTTCGAAGTCAAGTCTACTGC 1849735 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 |||||| || || | ||||| || || ||||| |||||||| ||| ||||| |||| Sbjct 1849734 TGGTGACACTCACTTGGGTGGTGAGGACTTTGACAATCGTCTGGTTAACCATTTCGTTA 1849676 >seq1 Length=6183525 Score = 170 bits (188), Expect = 6e-37 Identities = 181/236 (77%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| || || | | || ||||| ||||| || || || || ||||| || | Sbjct 607580 TTTGCATACCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGT 607639 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||||||||| || || |||||||| | |||||||| | Sbjct 607640 AGTCTGAGAGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGT 607699 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | |||||||||||||| ||||||||||| || ||| |||||||| || || | |||||| Sbjct 607700 CGGGAGGAATTCCTTCCTTATCCTGAATCTT-GCTCTTTACATTGTCGATGGTATCAGAC 607758 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | |||||| || || || | ||||| ||||| || || || || ||||| ||||| Sbjct 607759 GATTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 152 bits (168), Expect = 2e-31 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || |||||||| || || |||||||| || || || | Sbjct 607808 TTTGCATACCGCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGT 607867 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || || ||||||||||| |||||||| ||||| ||||| ||||| | Sbjct 607868 AGTCGCTCAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGT 607927 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||||||||| || |||||||| || | || || || ||||| | ||| | || Sbjct 607928 CAGGAGGAATTCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATC-GCTG 607986 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | ||| || ||||| || | ||||||||||| | ||| Sbjct 607987 GATTCGACCTCAAGGGTGATGGTCTTTCCGGTGACTGT 608024 Score = 84.2 bits (92), Expect = 7e-11 Identities = 191/284 (67%), Gaps = 5/284 (2%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || ||||| || ||||| || || || |||| | || || || ||||| Sbjct 2764466 GCTGTCATCACTGTCCCTGCCTACTTCAACGACAACCAGAGACAGGCTACCAAGGATGCC 2764525 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || ||||| | || || || ||||| || ||||| || || Sbjct 2764526 GGTGCCATTGCTGGTCTCAACGTTCTCCGTATCATCAACGAACCTACCGCTGCCGCCATC 2764585 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || || || || | | ||| ||| | || |||| | || || | ||| | Sbjct 2764586 GCTTACGGTCTCGGCTCCGGCAAGAGCGACAAGGAGCGAAATGTCCTGATCTACGATCTT 2764645 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | | | || |||| || || Sbjct 2764646 GGTGGTGGTACTTTCGATGTGTCTCTCCTGAACA-TCCAGGGCGGTGTTTTCACCGTCAA 2764704 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 |||||||| ||||| || || | ||||| ||||||| |||| Sbjct 2764705 GGCAACTGCCGGTGACACTCACTTGGGTGGTCAAGATTTCGATA 2764748 >seq8 Length=2671506 Score = 91.5 bits (100), Expect = 4e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || ||||| || ||||| || || || || || || || Sbjct 921321 ACCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 921262 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || ||||| ||||| || ||||| ||||||||||| || || || Sbjct 921261 GAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGG 921202 Query 140630 AATTCCTTCTTTATC 140644 ||||||||| || || Sbjct 921201 AATTCCTTCCTTGTC 921187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253856402484