Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 199 4e-46 seq9 98.7 1e-15 >seq2 Length=3929205 Score = 199 bits (220), Expect = 4e-46 Identities = 472/705 (67%), Gaps = 6/705 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| | | ||| || |||| |||||| ||||| | || ||||||||||| Sbjct 1715929 GAGACTTACAATCTGATGTCTCAGAAGTGCTTTACTCACGCTTCTCCTACCCTGTTCAAT 1715988 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 ||||| ||| ||| || || |||| ||||| || | | |||||||| ||| Sbjct 1715989 GCTGGAACGCCTCAGCCCCAACTGTCTTCATGCTTTTTGATTGACATGAAGGAGGACAGC 1716048 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || ||||||||||| || |||||| ||||| ||||||||| | || ||| Sbjct 1716049 ATTGAGGGCATCTACGATACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGT 1716108 Query 53423 ATCGGTATCCACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | || ||||| | | ||||| | ||| || || || || ||||| Sbjct 1716109 ATTGGTCT-CAATGCTCACTGCATTCGTGCCACTGGCTCATACATTGCTGGCACCAACGG 1716167 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | || |||| || | || ||||| | |||||||||||||| || || || ||| | Sbjct 1716168 TACCTCCAATGGCCTCATCCCCATGCTAAGAGTCTTCAACAACACTGCACGTTATGTCGA 1716227 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||| ||||| |||||| || | |||||||||||||| ||||| ||||| || || Sbjct 1716228 CCAAGGTGGCAACAAGCGCCCAGGTGCCTTCGCCATCTACCTGGAGCCATGGCATGCGGA 1716287 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | | || ||| | | || | ||| || || | ||||| | || ||| |||| Sbjct 1716288 TGTCTTCGACTTTTTGAACTTGAGGAAGAACCACGGCAAAGAAGAAGTCCG-TGCTCGTG 1716346 Query 53661 ACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 |||| || ||| || ||||||| ||| || || |||||| | || ||||| || || Sbjct 1716347 ACCTATTCTAC-GCCCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAAAACCAG 1716405 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779 || ||| ||| | ||||| | ||| ||||| || | |||||| || || || Sbjct 1716406 GATTGGACCCTCTTCTGCCCTCATGAGGCTCCCGGTCTTGCTGATGTCTATGGCGAAAAG 1716465 Query 53780 TTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 || | | | ||| || |||| | | || || ||| |||||||| Sbjct 1716466 TTCGAGGCTCTCTATGAGAAATACGAAAAAGAAGGACGTGGTCGCCAGACTGTCAAGGCT 1716525 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| |||| || || || ||| ||||| || || || ||||| Sbjct 1716526 CAGAAGCTGTGGTATGCTATTCTTGAGGCTCAGACTGAGACCGGTACACCTTACATCCTG 1716585 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 ||||||||| | ||||||||||||||||||||||||| | ||| Sbjct 1716586 TACAAGGATGCATGCAACGAGAAGAGCAACCAGAAGAACTTGGGC 1716630 >seq9 Length=1825699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 279/427 (65%), Gaps = 4/427 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || || |||||||| |||||||| || | || || | || | | Sbjct 1083501 CCCGTGCCGATTCCGTCAGCTCCGTTGACGAGAATCATAGGAATTATGGGTACATAGACC 1083560 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || ||||| | || || | ||||| | ||| | | || | | ||| ||| | Sbjct 1083561 TCAGGCTCGATCTTGCGATCATCATCTGTATTGTAGGTGAGAAGCGGTTCGTCTGCCTGG 1083620 Query 151996 TCGAATA--TCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 | ||||| | | | | | | ||| || || |||||||| || || | ||||| Sbjct 1083621 TGGAATAGTTTCCTGGCG--AAAGGCGACAGCCGAGTGAAGATATAACGAGCACTGGCGC 1083678 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 ||| ||||| || ||||| |||||||| || || || | || || |||| | Sbjct 1083679 AATCGTTGCCGCCCTGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACAT 1083738 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 |||| | ||||| |||||||| ||||| || || || |||||| | ||| | Sbjct 1083739 TGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCGC 1083798 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 ||||||| || || ||| | | | | | || | || ||||||||||||||| Sbjct 1083799 CGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCCT 1083858 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 || |||| || |||| ||| ||||| || ||||| || || || |||| ||| | Sbjct 1083859 TCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCAT 1083918 Query 152294 CCACCAC 152300 | || || Sbjct 1083919 CGACGAC 1083925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 275/422 (65%), Gaps = 1/422 (0%) Strand=Plus/Plus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || ||||| || || || || || | |||||||| || | | || || ||| Sbjct 1083499 AACCC-GTGCCGATTCCGTCAGCTCCGTTGACGAGAATCATAGGAATTATGGGTACATAG 1083557 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 | ||||||||| | || || | || || || ||| |||| | || | ||| | Sbjct 1083558 ACCTCAGGCTCGATCTTGCGATCATCATCTGTATTGTAGGTGAGAAGCGGTTCGTCTGCC 1083617 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | | ||||| ||| ||| | || | || |||||||| || ||||||| || || Sbjct 1083618 TGGTGGAATAGTTTCCTGGCGAAAGGCGACAGCCGAGTGAAGATATAACGAGCACTGGCG 1083677 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 ||| ||||| || | ||||| || || || || || ||| || || | Sbjct 1083678 CAATCGTTGCCGCCCTGATTTCGCGTGCCAAACTGGCCGGAAGGAACCAGTAGATTGACA 1083737 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 ||||| | |||||||| || || ||||| ||| || || || ||| | || Sbjct 1083738 TTGTTAGATCCCACAAAATTCTGGGCCAACCCGACGATAGTTTGCTGCAGGGAGGTTTCG 1083797 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCT 117508 || ||||| || || ||| | | ||| | || |||| |||||||||||||| Sbjct 1083798 CCGTGGTGGTAAGCAGTCATACCACCAACGAGAGCGGCAAGCTCGGCCACCTTCATGTCC 1083857 Query 117509 GACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCA 117568 | |||| || |||| || || || || ||||| || |||| |||||||||||| Sbjct 1083858 TTCTTCAGATTTCGTTTGAAACACGCGTACATGACCTTTCGTTGACCAGGCTTCAGACCA 1083917 Query 117569 TC 117570 || Sbjct 1083918 TC 1083919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215808474400