Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-41 seq2 183 3e-41 seq8 107 2e-18 seq4 107 2e-18 seq9 89.7 6e-13 >seq1 Length=6183525 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||||||||| || || || |||||||| || | Sbjct 607814 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 607755 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| || |||||||| ||||| ||||||||||| |||||| Sbjct 607754 GATACCATCGACAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAG 607695 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || |||||||| || |||| ||||||||| ||||||| || Sbjct 607694 CAACGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAAC 607635 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| || ||| | |||||||| || || Sbjct 607634 ATTCAGAAGGAATCGACCCTTCACCTTGTCCTCCGTCTTCGAGGCGG 607588 Score = 154 bits (170), Expect = 2e-32 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| || || | |||| ||||| || | ||| | Sbjct 608018 ACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGTCC 607959 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| ||||||||||| |||||||||||||| || || ||||| ||| Sbjct 607958 AAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGAAAG 607899 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||||| || || | || ||||| ||| ||||| || |||| || || ||||| || || Sbjct 607898 CAACTTGAAGACGGCCGCACCCTGAGC-GACTACAACATCCAGAAAGAGTCCACCCTCCA 607840 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||| | ||||| || || || Sbjct 607839 TCTTGTCCTCCGTCTCCGTGGCGG 607816 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||||||||| || || || || || || || || || || ||| | Sbjct 607586 ATGCAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCT 607527 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || ||||| || ||||| ||||||||||| || || || |||||| Sbjct 607526 GACACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAG 607467 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || |||||| | || || | ||| || || ||||||| || Sbjct 607466 CAACGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAAC 607407 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| |||||||||||||| ||||| ||| || Sbjct 607406 ATCCAGAAGGAATCCACTCTCCATCTCGTCCTG 607374 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||| ||||| || || ||||||||| Sbjct 607358 ATGCAGATCTTTGTCAAGACATTAACTGGAAAGACGATTACACTGGAAGTTGAGTCATCG 607299 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| ||||| || ||||||||||| || || || ||||| Sbjct 607298 GATACCATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAA 607239 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || || || | ||||||| ||| || || | ||||| || Sbjct 607238 CAGCGATTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGCACGCTCTCTGACTACAAC 607179 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| |||||| |||||| || | || || | ||||| || || || Sbjct 607178 ATCCAGAAGGAAAGCACTCTACACTTGGTGCTGAGACTTCGTGGCGGTCA 607129 >seq2 Length=3929205 Score = 183 bits (202), Expect = 3e-41 Identities = 557/852 (65%), Gaps = 23/852 (3%) Strand=Plus/Minus Query 80904 CAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGT 80963 ||| || || |||||||| || |||||||| |||| || |||||||| || ||||| Sbjct 1716714 CAGCGAGGCAAGATTGCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGT 1716655 Query 80964 GCACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAA 81021 |||||| || || ||| ||| || |||| ||| |||||||| ||| ||||||| Sbjct 1716654 GCACAAGTTTGAG--CTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCAT 1716597 Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081 || |||||||| ||||| || ||||||||||| ||| | || || || || | | Sbjct 1716596 GCATCCTTGTACAGGATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATAC 1716537 Query 81082 CAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAA 81141 || | || | |||||||| || ||| ||||| | || || | || Sbjct 1716536 CACAGCTTCTGAGCCTTGACAGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAG 1716477 Query 81142 GCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATC 81201 | |||||||| | || | | |||| || | || ||| | |||||| | Sbjct 1716476 AGAGCCTCGAACTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAG 1716417 Query 81202 AGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCG 81261 ||| ||| || || ||||| ||| |||||||||| ||||| |||| |||||| Sbjct 1716416 AGGGTCCAATCCTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCG 1716357 Query 81262 GTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320 ||| ||||| || ||| || | || || | || ||||| | ||| | | ||| Sbjct 1716356 TAGAATAGGTCACGAGCA-CGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAAAA 1716298 Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACG 81377 ||| | || |||||||||||||||||||| || | ||||| | || ||| Sbjct 1716297 GTCGAAGACATCCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTT 1716238 Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 |||||| |||| ||| ||||| ||||| ||| || || | | ||| ||||||| || Sbjct 1716237 GCCACCTTGGTCGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCC 1716178 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATT 81495 || || |||||| || || | || || || |||| || | | || ||| Sbjct 1716177 ATTGGAGGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATT 1716118 Query 81496 GAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555 | ||||| || || || | ||| || ||| |||||| || | || || || Sbjct 1716117 G--AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAG 1716060 Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT 81615 || ||||| ||||| || | |||||||||| ||| || || |||| || |||| Sbjct 1716059 ATGCCCTCAATGCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTG-GGGC-- 1716003 Query 81616 TTTGAG-----CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670 |||| || ||||||||||| || || | |||||| | || | | |||| Sbjct 1716002 --TGAGGCGTTCCAGCATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACA 1715945 Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730 |||| | || || || || | | || || || |||||||| | || |||| Sbjct 1715944 TCAGATTGTAAGTCTCGATGGCCTTCTCGACGTCATCGCCATGAATACCAACAGACACAC 1715885 Query 81731 GCATAAACATGT 81742 |||| ||||||| Sbjct 1715884 GCATCAACATGT 1715873 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| || | || |||| || || |||||||||||||| ||||| Sbjct 1717625 ACGGTGAACTGAATGGGTTGGGTGGCTGCCATAGTTCGGAGATAGTACATGCCAGTCTTC 1717566 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 | |||| ||||||||||| | |||||| || ||| ||| | | || || ||| Sbjct 1717565 AAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTACCCA-TGGTTGGCTCTTT 1717507 Query 80125 ATGAAG-ATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCAT 80180 || | ||||| || |||||||||||| |||||| || ||||| || || ||||| Sbjct 1717506 GAGATGAATGTTGAGTGACTGAGACTGATCGATGAAGGCACCACGGTCGGCAGCCAT 1717450 >seq8 Length=2671506 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| |||||||| || |||||||| ||||| || || || || |||||||||||| Sbjct 921187 GACAAGGAAGGAATTCCCCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAACTCGAG 921246 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | ||||| || |||| ||||| || || ||||| || ||| | Sbjct 921247 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 921306 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 921307 CGTCTGCGTGGTGG 921320 >seq4 Length=3791951 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || ||||||||||| || || ||||| ||||| || | ||| Sbjct 1156315 CTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCAT 1156256 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || ||||||||||| || || || || |||||||| || | Sbjct 1156255 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCACCTGACCAGCAACGATT 1156196 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || |||||||||||||| | || || || ||| ||||| || | || | Sbjct 1156195 GATCTTCGCCGGAAAGCAACTCGAGGACGGCCGAACACTCAGC-GACTACAACATTCAGA 1156137 Query 27593 AGG 27595 ||| Sbjct 1156136 AGG 1156134 >seq9 Length=1825699 Score = 89.7 bits (98), Expect = 6e-13 Identities = 278/428 (65%), Gaps = 2/428 (0%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || || |||||| || || ||||| || ||||| || |||| || ||| | Sbjct 1083919 GATGGTCTGAAGCCTGGTCAACGAAAGGTCATGTACGCGTGTTTCAAACGAAATCTGAAG 1083860 Query 32044 AGTGACATGAAGGTGGCGCAGCT-GTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 | |||||||||||||| |||| | || || ||| | | || || || ||||| Sbjct 1083859 AAGGACATGAAGGTGGCCGAGCTTGCCGCTCT-CGTTGGTGGTATGACTGCTTACCACCA 1083801 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 |||||| | || || ||| || || ||| | || ||||| ||||| || | || Sbjct 1083800 CGGCGAAACCTCCCTGCAGCAAACTATCGTCGGGTTGGCCCAGAATTTTGTGGGATCTAA 1083741 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 || | || |||| | || || || |||||||| || || || ||||| || Sbjct 1083740 CAATGTCAATCTACTGGTTCCTTCCGGCCAGTTTGGCACGCGAAATCAGGGCGGCAACGA 1083681 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGA 32282 | || || | ||||| |||||||| || || | |||| | | || | ||| | Sbjct 1083680 TTGCGCCAGTGCTCGTTATATCTTCACTCGGCTGTCGCCTTTCGCCAGGAAACTATTCCA 1083621 Query 32283 CCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGT 32342 || | | ||||| || | |||| |||||| ||||| | || | ||||||| | Sbjct 1083620 CCAGGCAGACGAACCGCTTCTCACCTACAATACAGATGATGATCGCAAGATCGAGCCTGA 1083561 Query 32343 GTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | |||| || | |||| ||||| | || ||||| || || || ||||| ||||| Sbjct 1083560 GGTCTATGTACCCATAATTCCTATGATTCTCGTCAACGGAGCTGACGGAATCGGCACGGG 1083501 Query 32403 GTTCAGTT 32410 | |||| Sbjct 1083500 TTGGAGTT 1083493 Score = 89.7 bits (98), Expect = 6e-13 Identities = 155/226 (69%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 30327 TGGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGG 30386 ||| ||||||||| | | ||| | | || || || | ||||| ||| | || ||||| Sbjct 1085690 TGGTATTCCCATTGAAATTCACTCCAAAGAGAAGATTTATATCCCGGAAATGATCTTTGG 1085631 Query 30387 GCACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAA 30446 |||||| | ||| | || |||||| ||||| | || || || || || || |||| Sbjct 1085630 CCACCTTCTCACAGGTTCGAACTACGACGACAATGAACAAAAAGTTACTGGAGGCAGAAA 1085571 Query 30447 TGGCTACGGTGCAAAGCTCGCCAACGTTTTCAGTTCCCTATTCAAAATCAAAATTAGTGA 30506 ||| || ||||| || || ||| | |||||| | ||||| ||| ||| | ||| Sbjct 1085570 TGGATATGGTGCGAAACTTTGTAACATATTCAGTACAGAATTCACCATCGAAACTGCTGA 1085511 Query 30507 CGG------GAAGAAGATATATGAGCAGACTTGGACAGATAACATG 30546 | |||||||| || ||||||||||||| |||||||| Sbjct 1085510 TGCCCGCCAGAAGAAGAAGTACAAGCAGACTTGGACCAATAACATG 1085465 Score = 82.4 bits (90), Expect = 9e-11 Identities = 199/293 (68%), Gaps = 9/293 (3%) Strand=Plus/Minus Query 31253 AGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGA 31312 ||||||| | || | || || ||||||||||| || | ||||| || || || | || Sbjct 1084689 AGTGCACTTTGATCTTGACAGAAGGTGACTCGGCCAAAGGTCTTGCCATGGCAGG-TCGA 1084631 Query 31313 GT-GTTGTGGGGCGCAATGCGTTCGGGGTGTTT--CCGCTCCGAGGCAAGCCGCGTAACG 31369 || ||||| | | | | | ||||||| | || ||||| ||||||| | |||| Sbjct 1084630 TCAGTCGTGGGCCCCGA--CTTATGGGGTGTATTCCCTCTCCGTGGCAAGCTCCTAAACG 1084573 Query 31370 TTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGA 31429 | || || || || || | || || || | || | |||| | ||| | || || Sbjct 1084572 TCCGAGATGCTTCGATTGACCAAATTTCGAAGAACGCAGAGATCCAGAACATCAAGAACT 1084513 Query 31430 TCCTCGGGCTTCAGCATGGCAAGGTATATAATTCACTGAGA-GAATTGCGGTACGGTCGC 31488 |||| || ||||||||| ||||| |||| || || | | |||||||||||||| Sbjct 1084512 TCCTTGGCCTTCAGCATAAGAAGGTTTATACCG-ACAGACAAGGCTTGCGGTACGGTCGG 1084454 Query 31489 CTCATGATTATGACCGACGCAGATCTCGACGGCAGTCACATCAAGGGTCTTGT 31541 | ||||| ||||| || |||| || || || ||||| ||||| ||||| Sbjct 1084453 TTAATGATCATGACTGATCAGGATCATGATGGTAGCCACATTAAGGG-CTTGT 1084402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310200391360