Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=6183525 Score = 105 bits (116), Expect = 6e-18 Identities = 238/353 (67%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327 || || || |||||| | ||| ||||| | || | ||||||||| ||| | Sbjct 731581 GAACTTCTCTGGTTCATCTCCGGGTGCACGAGCTCCCAACCGCTCTCGTCAGCGGGCATA 731640 Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 | |||||||||| |||| ||||| || ||||| ||||| | || ||| | ||| Sbjct 731641 CACATCTGGGACGGCAACGGATCTCGCGAGTTTCTCGACAACCTAGGCTTCACGGACCGG 731700 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 || ||||||||| ||||||| || ||||||||||||||| | ||||| || ||| || Sbjct 731701 GAAGAGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCGCCCTAC 731760 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GC--AGTACGTGATC 34504 || || | |||||||| |||| |||| | |||||| | || || |||| | Sbjct 731761 TCGGACTGCCACGCGGACTACGCGGGCAAGGGCGTCGACCAGATCGCCGAGATCGTG--C 731818 Query 34505 GACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAG 34564 | | || || | |||||| | ||| | | ||| | | |||| |||||| Sbjct 731819 GCAAGCTCAAAAC-CAACCCTTACGACCGTCGCATCATCCTCAGCGCATGGAACGTCGCC 731877 Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 || || || ||||| ||||| ||||| |||| || ||| |||||||| Sbjct 731878 GACCTGAAACTCATGGCTCTCCCGCCGTGTCACATGTTCGCCCAGTTCTACGT 731930 Score = 105 bits (116), Expect = 6e-18 Identities = 238/353 (67%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| ||| || |||| ||||| ||||| ||||| || || || | Sbjct 731930 ACGTAGAACTGGGCGAACATGTGACACGGCGGGAGAGCCATGAGTTTCAGGTCGGCGACG 731871 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| |||| | | ||| | | ||| | |||||| | || || | || |||| Sbjct 731870 TTCCATGCGCTGAGGATGATGCGACGGTCGTAAGGGTTG-GTTTTGAGCTTGCG--CACG 731814 Query 6848 TACT--GC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCC 6904 || || | |||||| | |||| |||| |||||||| | || || || | Sbjct 731813 ATCTCGGCGATCTGGTCGACGCCCTTGCCCGCGTAGTCCGCGTGGCAGTCCGAGTAGGGC 731754 Query 6905 GCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGAT 6964 || || ||||| | ||||||||||||||| || ||||||| ||||||||| ||||| Sbjct 731753 GCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCTTCCCGGTCC 731694 Query 6965 GGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | ||| || | ||||| ||||| || ||||| |||| |||||||||| | | ||| Sbjct 731693 GTGAAGCCTAGGTTGTCGAGAAACTCGCGAGATCCGTTGCCGTCCCAGATGTGTATGCCC 731634 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 ||||||||| | || | ||||| ||| | |||||| || || || Sbjct 731633 GCTGACGAGAGCGGTTGGGAGCTCGTGCACCCGGAGATGAACCAGAGAAGTTC 731581 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 34619 GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTG 34678 ||||| || | || || ||| || || || || || | |||||||| | || ||| Sbjct 732019 GCGAAGGGACATCTCTCGTGCGTCCTGTACCAGCGGTCATGCGACATGGGTCTCGGCGTG 732078 Query 34679 CCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTT 34737 ||||||||||| || || ||||| ||||||||| ||||| |||| | | |||| | | Sbjct 732079 CCGTTCAACATCGCAAGCTACGCCCTGCTCACGCACATGCTCGCCTACG-CGTGCGACCT 732137 Query 34738 GGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 || || || || ||| | || || |||| || ||||| | |||||| |||||||||| Sbjct 732138 CGTCCCCGGCGAACTGATCCACACCATGGGCGACGCGCACGTGTACCTGGACCACATCGA 732197 Query 34798 -GCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCC 34839 ||| ||| || ||||| || ||||| || |||||| Sbjct 732198 CGCGTTGAAGGA-GCAACTGCAGCGCGAGCCGCGGGAGTTCCC 732239 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGC-TCGATGTGGTTCAGGTA 6564 |||||| || ||||| || ||||| || ||| ||| |||||||||| |||||| Sbjct 732239 GGGAACTCCCGCGGCTCGCGCTGCAGTTGC-TCCTTCAACGCGTCGATGTGGTCCAGGTA 732181 Query 6565 GATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC-CACGACATGAG 6623 | ||||| || |||| || || | ||| || || || || | | |||| | | | Sbjct 732180 CACGTGCGCGTCGCCCATGGTGTGGATCAGTTCGCCGGGGACGAGGTCGCACG-CGTAGG 732122 Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 ||| ||||| ||||||||| ||||| || || |||||||||||||| || | ||||||| Sbjct 732121 CGAGCATGTGCGTGAGCAGGGCGTAGCTTGCGATGTTGAACGGCACGCCGAGACCCATGT 732062 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC 6726 | | || || || || || ||| || || | || ||||| Sbjct 732061 CGCATGACCGCTGGTACAGGACGCACGAGAGATGTCCCTTCGC 732019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262243108160