Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 183 7e-41 seq2 132 1e-25 seq4 120 7e-22 seq8 98.7 2e-15 >seq1 Length=6183525 Score = 183 bits (202), Expect = 7e-41 Identities = 173/221 (78%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | |||||||||||||| || || || || || ||||| || || | ||||| Sbjct 607594 CGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTA 607653 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| || ||||||||||| ||||| | |||||| ||||| ||||||| |||| Sbjct 607654 CGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCT 607713 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||| ||||| || || || |||||||| ||||| |||||||||||| Sbjct 607714 TCCTTATCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGG 607773 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 607774 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 158 bits (174), Expect = 3e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || ||||||||||| |||||||| || || ||||| | || ||| Sbjct 607831 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCT 607890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| || || ||||||||||||| ||||||||||||| Sbjct 607891 TCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 607950 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || ||||| || | ||| ||||| || ||||| ||| Sbjct 607951 TGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTC 608010 Query 211083 TTTCCCGTGA 211092 ||||| |||| Sbjct 608011 TTTCCGGTGA 608020 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| || || |||||||| || || |||||||| || || | ||| || | || Sbjct 607371 TCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACC 607430 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | ||||| ||||||||||| | |||||| ||||| || || | || ||||| Sbjct 607431 GTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCTT 607490 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| |||||||| || ||||||||||| ||| || ||||| ||||| Sbjct 607491 GTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTGAT 607550 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || ||||| ||||| | ||||| Sbjct 607551 GGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || | ||| |||||| || || |||||||| || || | || || Sbjct 607137 ACGAAGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGT 607196 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||| |||||||| ||||| | || ||||||||||| || | || Sbjct 607197 GCGACCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCC 607256 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| ||||| || || ||||| |||||||| || || ||||| || || Sbjct 607257 CTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACTTCCAG 607316 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| || | ||||| ||||| | |||||| Sbjct 607317 TGTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 >seq2 Length=3929205 Score = 132 bits (146), Expect = 1e-25 Identities = 202/283 (71%), Gaps = 10/283 (4%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTT-TC--TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 || |||||||| ||||||||||| || |||| ||||| |||||| ||| | || Sbjct 1716629 CCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCAT---GCATCCTTGTACAGGATGTAAGGT 1716573 Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204 | || ||||| |||||| | ||||| || ||| |||| ||| || ||||||| Sbjct 1716572 GTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTGACAGTC 1716513 Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAA--TTCCGGTCCAT 178262 | | |||||| || ||||| || | ||||| ||||||| || || |||| Sbjct 1716512 TGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCG--CCAT 1716455 Query 178263 AGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCT 178322 |||||||| | |||||||||||||||| ||||||||||| |||| | || || || Sbjct 1716454 AGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCT 1716395 Query 178323 TCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || |||||||| || |||| ||||| | ||| ||||| Sbjct 1716394 CAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAA 1716352 >seq4 Length=3791951 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || || ||||| || |||||||| | ||||| |||||||| || | |||||| Sbjct 1156166 CCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCGTTGCTGGTCAGGTGGGATGCCTTCC 1156225 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| || || || ||||||||||| || || |||||||| ||| Sbjct 1156226 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 1156285 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| ||||| || || Sbjct 1156286 ATAGTCTTGCCCGTGAGGGTCTTGACGAA 1156314 >seq8 Length=2671506 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || || | || || | || || Sbjct 921305 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 921246 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || || ||||| || |||||||| || ||||| ||||| || |||| |||||||||||| Sbjct 921245 TCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGAATTCCTTCCTTGTC 921187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151584154220