Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 188 1e-42 >seq2 Length=3929205 Score = 188 bits (208), Expect = 1e-42 Identities = 1169/1859 (63%), Gaps = 45/1859 (2%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 || || ||||||||||| ||||| || | |||| |||| ||| || |||||| | Sbjct 1717592 GTTCGGAGATAGTACATGCCAGTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGAT 1717533 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTAT-----ATGAATATTCATCGACTGACTTTGAT 76926 || | || | | | | | |||| | |||||| || | |||||| |||| Sbjct 1717532 GTGATCTT-----ACCCATGGTTGGCTCTTTGAGATGAATGTTGAGTGACTGAGACTGAT 1717478 Query 76927 CGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAA 76986 ||||||| || || | || || ||||| | | || || ||| |||||||| | Sbjct 1717477 CGATGAAGGCACCACGGTCGGCAGCCATCTGCAGAACAGTACGCTGACTGATTTCCCAGA 1717418 Query 76987 TAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCAC 77043 || ||| | | || || ||||| || | ||||| | || ||||| || |||| Sbjct 1717417 CGGTCTTGTACAGAGCCTTAATGTCATCAGGGATGTTTGGAATGTTCTGAATCGATCCAC 1717358 Query 77044 CATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTC 77103 | || | || || ||||| |||| ||| ||| | | || | | Sbjct 1717357 CCTCGGCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCAGGTCGACCAGGTCCT 1717298 Query 77104 TAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 77163 | || || || || || | ||| ||||| |||| ||| || | |||| || || | Sbjct 1717297 TCAGCAGCCATGGGTTGACAACTTGGAATTCACCAGCCAACACACGTCGAGAATAGATGT 1717238 Query 77164 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTG 77223 | || ||||| || | |||| ||||| ||||| || || | || || ||||| | Sbjct 1717237 TCGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGATCTGGGAGGTCGATGCAGTAG 1717178 Query 77224 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGAT 77283 |||| || || || | | || | || ||| || | || | | || || Sbjct 1717177 GCATGGGAGCAACTAGCAGGGAGTTCCGGACACCGTGCTTAGCAATCTCTGCCTTCAGGC 1717118 Query 77284 ATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGT 77343 | ||| ||||| || || ||||| |||| ||| | || ||||| || || || | Sbjct 1717117 TATCCCAGTCCCAGAGGTCGGAAGGAGTGACATTCCACATGTCATATTGAAGGATGCC-T 1717059 Query 77344 TACTAGCATATGAT-CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAA 77402 | || | | | || | ||| |||||||| | |||| | | || || |||||| Sbjct 1717058 TGTGAGACTGGGCTGCCCTCATACGTTTCATAGGTGCCTTGTTCCTTGGCAAGCTCACAA 1716999 Query 77403 CTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCT 77462 ||| |||||| ||| |||||| || ||||| |||| | ||||| | | ||| Sbjct 1716998 GAGGCTGTCAATGCGGCGTGATAAATGGTCTCGAAGATCTGAATGTTGAGCTGTCTGGCT 1716939 Query 77463 TCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 || | || || || | ||| | || ||||| || | || ||||| ||| Sbjct 1716938 TCTGGAGAGTCGAATGGTAGACGTAGTGCGAGGAAAGCATCCGCCAGACCTTGAACACCA 1716879 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 | ||||| ||||| ||||||| | ||| | || || || || | || || || || Sbjct 1716878 AGACCAACAGGTCGATGTCTCATGTTGCTCTTCTTTGCCTCGGGTACCGGGTAGTAGTTG 1716819 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTT---TAACCACGTCCTTTAGTTTA 77639 | ||| || || || || || |||| | ||||||| ||||| ||| | || | Sbjct 1716818 ACGTCAATGATCTTGTTTAGGTTTCGAGTGACTACTTGGGTAACCTCGTGC---AGGCGA 1716762 Query 77640 AGAAAATCAAATCTTCCAT----CT-ATA-ACAAACATGTTCAAAGCTATAGATGCTAGA 77693 || ||| | ||| || || || || | || || | || || ||| Sbjct 1716761 CCGAAGTCATACTCGCCAGTAGACTGATCGACGAAAGTCGGCAGTGCCAGCGAGGCAAGA 1716702 Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTA 77753 || || || || ||||||| || | | | | | ||||| || || | || Sbjct 1716701 TTGCAGACAGCCACCTCATCAGGGGAAGTGAACTCGACAATCTCCGTGCACAAGTTTGAG 1716642 Query 77754 CATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGA 77813 | | || ||||||| || | ||||||||||| | ||||||| ||||| || || Sbjct 1716641 CTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAGG 1716582 Query 77814 ATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGC 77872 || | || || ||||| ||| |||| | || | ||||| | ||| | | ||| ||| Sbjct 1716581 ATGTAAGGTGTACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACA-GCTTCTGAGC 1716523 Query 77873 TTTTATCATAGATTTGT-ATCGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAA 77929 || | || | | | | | || ||| |||| |||| ||| || || || Sbjct 1716522 CTTGAC---AGTCTGGCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAA 1716466 Query 77930 TTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTC 77989 | || || | |||||| | | || || |||| ||||| | | | ||| || Sbjct 1716465 CTTTTCGCCATAGACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATC 1716406 Query 77990 ACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 78049 | || || ||| || ||||| || |||||||| |||| || || ||||| || Sbjct 1716405 CTGGTTTTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTC 1716346 Query 78050 TCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT-AAGATCGAGAAACTCCATAATAT 78108 || | | |||||| || || ||||| | ||| || | ||| || | | || Sbjct 1716345 ACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAA-AAAGTCGAAGACAT 1716287 Query 78109 CAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGAT 78168 | | ||||||||| || || || || || | | || || || || || || || || | Sbjct 1716286 CCGCATGCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGT 1716227 Query 78169 CTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTC 78228 | | ||| | || ||||| || | ||||| | ||| || || | || || || || | Sbjct 1716226 CGACATAACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTAC 1716167 Query 78229 CATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTAT 78286 | || || |||| ||| || ||| | || ||||| | | || || | || || Sbjct 1716166 CGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGA--CCAAT 1716109 Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346 || || || |||| || || | ||| || || | |||||||||||| ||||| || Sbjct 1716108 ACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAAT 1716049 Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406 ||||| ||| |||||| || | ||| || ||||| ||| | ||| ||||| || Sbjct 1716048 GCTGTCCTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGC 1715989 Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 ||| || | || ||||| || || ||||| || || | ||| | |||||||| || || Sbjct 1715988 ATTGAACAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTC 1715929 Query 78467 AATAGCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || || || | || ||| | |||||| || || | |||||||||||||| || Sbjct 1715928 GATGGCCTTCTCGACGT--CATCGCCATGAATACCAACAGACACACGCATCAACATGTGT 1715871 Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584 || |||| |||| | | || || || | |||||||||| | ||||| || || Sbjct 1715870 TGTGGTCGTTCAGCAACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTG 1715811 Query 78585 AAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC 78643 || ||||| || | ||| ||||||| || || | ||| | || || || | ||| Sbjct 1715810 AAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATC 1715752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668556865920