Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 203 5e-47 >seq2 Length=3929205 Score = 203 bits (224), Expect = 5e-47 Identities = 437/647 (68%), Gaps = 10/647 (2%) Strand=Plus/Minus Query 76591 TTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 76650 || || ||| || ||||| || |||||||| |||| || || ||||| || || | Sbjct 1716399 TTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGGGCGTAGAATAGGTCACGAGC 1716340 Query 76651 TCTACGTTCTTCATTTCCTGTATTCTTTTT-AAGATCTAGGAACTCCATAATATCAGAAT 76709 | |||||| || || ||||| | ||| || | || || | | ||| | || Sbjct 1716339 ACGGACTTCTTCTTTGCCGTGGTTCTTCCTCAAGTTCAAA-AAGTCGAAGACATCCGCAT 1716281 Query 76710 GCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATAT 76769 ||||||| || || || || || | |||| || || || || || || || || | || Sbjct 1716280 GCCATGGCTCCAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACCTTGGTCGACAT 1716221 Query 76770 ATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTG 76829 | | |||||||| || | ||||| | ||| || || | ||| || || ||||| || | Sbjct 1716220 AACGTGCAGTGTTGTTGAAGACTCTTAGCATGGGGATGAGGCCATTGGAGGTACCGTTGG 1716161 Query 76830 TTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCC 76887 | |||| ||| || ||| |||||||| | | || || | || || || || Sbjct 1716160 TGCCAGCAATGTATGAGCCAGTGGCACGAATGCAGTGAGCATTGAGA--CCAATACCGCC 1716103 Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATC 76947 || | || ||||| | ||||||| || | ||| || ||||||||||| || || || Sbjct 1716102 AGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTATCGTAGATGCCCTCAATGCTGTC 1716043 Query 76948 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 77007 ||| |||||| || | ||| || ||||| ||| | ||| ||||| ||||| || Sbjct 1716042 CTCCTTCATGTCAATCAAAAAGCATGAAGACAGTTGGGGCTGAGGCGTTCCAGCATTGAA 1715983 Query 77008 CAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAAC 77067 || |||||||| || ||||| || || || | ||| | |||||||| || || || | Sbjct 1715982 CAGGGTAGGAGAAGCGTGAGTAAAGCACTTCTGAGACATCAGATTGTAAGTCTCGATGGC 1715923 Query 77068 TGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125 ||||| | ||| | |||||| || |||| |||||||||||||| || || ||| Sbjct 1715922 --CTTCTCGACGTCATCGCCATGAATACCAACAGACACACGCATCAACATGTGTTGTGGT 1715865 Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185 ||||| || | || || || | |||||||||| | ||||| || || || ||| Sbjct 1715864 CGTTCAGCAACTTGTTTGCCGATCTTGAGCAAGTATGATCTCTCCAACGTCTTGAAGCCA 1715805 Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 || || | ||| ||||||| || || | ||| |||| || || Sbjct 1715804 AAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAG 1715758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934150472960