Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 seq4 93.3 1e-13 >seq1 Length=6183525 Score = 114 bits (126), Expect = 3e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| ||||| ||||| || || || ||||||||||| || | | ||||| || Sbjct 607371 TCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACC 607430 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCT 152007 ||||||| ||||| |||||||| |||| | |||||||||| | ||| || |||| Sbjct 607431 GTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGT-TGCTGGTCCGGTGGGATACCCTCCT 607489 Query 152008 TTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAA 152067 | |||||||| || || || | || | | |||| || || ||||| || || | Sbjct 607490 TGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTGA 607549 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || ||||| || |||| ||||| Sbjct 607550 TGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || || |||||||| ||||||||||| ||| | || | Sbjct 607824 GAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCG 607883 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| || ||||||||||| | ||||||||| | | |||||| Sbjct 607884 GCCGTCTTCAAGTTGCTTT--CCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCT 607941 Query 152004 TCCTTTTCTTGAATTTT 152020 ||||| || ||||| || Sbjct 607942 TCCTTGTCCTGAATCTT 607958 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| ||||| || || || || || |||||||| || | | || | ||||| Sbjct 607602 GAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATC 607661 Query 151952 TTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||| || || || || ||||| |||| | |||||||| | | ||||||||||| | Sbjct 607662 TTCAAGTTGCTTGCCTGCAAAGATCAAGCGT-TGCTGGTCGGGAGGAATTCCTTCCTTAT 607720 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | | | || || || || || || || || | Sbjct 607721 CCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGG 607780 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||| ||||| | ||||| Sbjct 607781 TCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 >seq4 Length=3791951 Score = 93.3 bits (102), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || || |||||||| ||| | |||| || || || || ||||| |||||||||| Sbjct 1156136 TTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTT--CCGGCGAAGA 1156193 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | |||||||| | | ||| |||||||| || || || || |||||| | | Sbjct 1156194 TCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 1156253 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| ||| ||| || || || || ||||| ||||||||||| ||||| |||| Sbjct 1156254 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1156313 Query 152095 AG 152096 || Sbjct 1156314 AG 1156315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820386066788