Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 190 4e-43 seq4 134 3e-26 seq8 105 1e-17 seq9 86.0 1e-11 >seq1 Length=6183525 Score = 190 bits (210), Expect = 4e-43 Identities = 181/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || | || |||| |||| |||||||| || |||||||||||||||| Sbjct 607131 ACCGCCACGAAGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGA 607190 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| | ||||| || ||||||||||| || ||||||||| || Sbjct 607191 GAGCGTGCGACCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGG 607250 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||||||||| |||||| || ||| | ||||| || ||||| | || | Sbjct 607251 GATGCCCTCCTTGTCTTGGAT-TTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAA 607309 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| || || |||||||| || || || ||||| || || |||||||| Sbjct 607310 CTTCCAGTGTAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Score = 156 bits (172), Expect = 9e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || || ||||| | ||| ||| || |||||||||||||| | ||| || || || || Sbjct 607375 AGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGACCGTCT 607434 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 |||| ||| ||||| || |||||||| ||||| ||||| || ||||||||||||||| Sbjct 607435 TCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCCGGTGGGATACCCTCCTTGTCT 607494 Query 283008 TGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || ||| ||||| || ||| | || || ||||| || | |||||||||||| ||||| || Sbjct 607495 TGAATC-TTGCTCTTCACGTTGTCAATGGTGTCAGATGATTCGACTTCGAGTGTGATGGT 607553 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||| ||||| || || || ||||| Sbjct 607554 TTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || || || | || ||| || || ||||||||||| | Sbjct 607587 ACCGCCTCGAAGACGGAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGA 607646 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 607647 GAGGGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGG 607706 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || ||||| || || ||| ||||| ||||| | ||||| || || || | ||| | Sbjct 607707 AATTCCTTCCTTATCCTGAATC-TTGCTCTTTACATTGTCGATGGTATCAGACGATTCAA 607765 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 607766 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || ||||| | ||| ||||| |||||||||||||| Sbjct 607815 ACCGCCACGGAGACGGAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCT 607874 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || ||||| || || || ||||| | ||| || |||||| || Sbjct 607875 CAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 607934 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | || || || || | |||||| Sbjct 607935 AATTCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGAC 607994 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 607995 CTCAAGGGTGATGGTCTTTCCGGT 608018 >seq4 Length=3791951 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || ||||||||||| || || ||||| ||||| ||||| || ||||| |||||| Sbjct 1156136 TTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATC 1156195 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || ||||| |||||| || || || |||||||| |||||||| | || || | ||| Sbjct 1156196 AATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1156255 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| |||| || || ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 1156256 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 1156314 >seq8 Length=2671506 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 921321 ACCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 921262 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| ||||| || ||||| ||||||| |||||| ||||| || Sbjct 921261 GAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGG 921202 Query 282992 AATACCCTCCTTGTCT 283007 ||| || ||||||||| Sbjct 921201 AATTCCTTCCTTGTCT 921186 >seq9 Length=1825699 Score = 86.0 bits (94), Expect = 1e-11 Identities = 246/368 (67%), Gaps = 8/368 (2%) Strand=Plus/Plus Query 274433 GATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACA-AC 274491 |||||| ||||| |||| ||||| ||||||||| | |||||| ||||| || Sbjct 1084325 GATGGGAGTGATGAATTCAACTAGGAAGTCTGGAATTTTCAACAGACTAGGGAACTGCAC 1084384 Query 274492 TATGGAAAAAGTTCATGA-CAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGTC 274550 | || |||||||| || | |||| ||| | ||||| | || ||| || ||| ||| Sbjct 1084385 T-TGTAAAAAGTTGATCAACAAGCCCTTA-ATGTGGCTACCATCATGATCCTGATCAGTC 1084442 Query 274551 ATGATCATAACATGTCCATACCG-AAGCGAGGAAGTATCTTTATACAACTTCCCTGTTTG 274609 |||||||| | | || ||||| |||| | | || |||| | |||| || Sbjct 1084443 ATGATCATTAACCGACCGTACCGCAAGCCTTGTC-TGTCGGTATAAACCTTCTTATGCTG 1084501 Query 274610 AAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCCACAG 274668 ||| ||||| | | ||||| | | | ||| ||| ||||||| | || | | | Sbjct 1084502 AAGGCCAAGGAAGTTCTTGATGTTCTG-GATCTCTGCGTTCTTCGAAATTTGGTCAATCG 1084560 Query 274669 AAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGCGCC 274728 ||||||| || ||||| || | ||| || ||||||||||| || || | ||| | | Sbjct 1084561 AAGCATCTCGGACGTTTAGGAGCTTGCCACGGAGAGGGAATACACCCCATAAGTCGGGGC 1084620 Query 274729 CGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGAATCA 274788 | | ||| || |||| || || || ||| | || || || || ||||| | |||| Sbjct 1084621 CCACGACTGATCGACCTGCCATGGCAAGACCTTTGGCCGAGTCACCTTCTGTCAAGATCA 1084680 Query 274789 AAGTACAC 274796 |||| ||| Sbjct 1084681 AAGTGCAC 1084688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738824482312