Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 118 8e-22 seq1 116 3e-21 seq8 84.2 2e-11 >seq4 Length=3791951 Score = 118 bits (130), Expect = 8e-22 Identities = 140/188 (74%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 44144 CTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCA 44203 ||| |||| || |||||||| ||| |||| || |||| || || ||||| ||||| Sbjct 1156130 CTCACCTTCTGAATGTTGTAGTCGCTGAGTGTTCGGCCGTCCTCGAGTTGCTTTCCGGCG 1156189 Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CA 44261 |||||||| || ||||| || | || | |||||||| ||| ||||| ||| || Sbjct 1156190 AAGATCAATCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACA 1156249 Query 44262 ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCT 44321 ||| | |||||||||| || |||||||| | || || ||||| ||||||||||||| Sbjct 1156250 TTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCT 1156307 Query 44322 TCACGAAG 44329 | |||||| Sbjct 1156308 TGACGAAG 1156315 >seq1 Length=6183525 Score = 116 bits (128), Expect = 3e-21 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| ||||| ||| || ||||| ||||| ||||||||||| || | ||| ||| Sbjct 607141 AGTCTCAGCACCAAGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGA 607200 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| ||| || || ||||||||||| ||||| || || | || | || ||| Sbjct 607201 CCATCCTCCAACTGTTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGGATGCCCTCC 607260 Query 44240 TTTTCCGTTATCTTCTGCT-TCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 || || || || |||| | | ||| | ||||| || | || || || |||| | Sbjct 607261 TTGTC--TTGGATTTTGCTCTTGACGTTGTCGATGGTATCCGATGACTCAACTTCCAGTG 607318 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||| || | ||||| || ||||| ||||| Sbjct 607319 TAATCGTCTTTCCAGTTAATGTCTTGACAAAGATCTGCAT 607358 Score = 114 bits (126), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||||| || |||||||| || | ||| || | || || Sbjct 607606 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGAGAGGGTACGACCATCTTCA 607665 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || ||||||||||| || ||||| || | ||| | |||||||| ||| Sbjct 607666 AGTTGCTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATTCCTTCCTTATCCTGA 607725 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||| || | ||||| ||||| | || || |||| Sbjct 607726 ATCTTGCTCTTTACATTGT--CGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCT 607783 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| |||||||| Sbjct 607784 TGCCGGTGAGGGTCTTGACGAAAATTTGCAT 607814 Score = 109 bits (120), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| | ||||| || || || || ||| ||||| ||||||||||| || Sbjct 607356 CATACCTCCTCTTAATCTCAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTC 607415 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| || |||| || | |||||||| || |||||||| || ||||| || Sbjct 607416 TGAAAGAGTT--CGACCGTCTTCTAATTGCTTCCCTGCGAAGATCAAGCGTTGCTGGTCC 607473 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||| ||||| || ||||| ||||| | | |||||||| | ||| Sbjct 607474 GGTGGGATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATGGTGTCAGATGAT 607533 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || || ||||| || || ||||| || ||||||||||| Sbjct 607534 TCGACTTCGAGTGTGATGGTTTTTCCTGTCAGCGTCTTGACAAAGATTTGCAT 607586 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| ||| || ||||||||||| ||| || ||| |||| || Sbjct 607834 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCTTCA 607893 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||| | ||||||||| || | ||| | |||||||| ||| Sbjct 607894 AGTTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGA 607953 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| ||| |||||| ||||| | || || |||||| Sbjct 607954 ATCTTGGACTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTT 608013 Query 44309 CCCGTGA 44315 || |||| Sbjct 608014 CCGGTGA 608020 >seq8 Length=2671506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 921302 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCG 921243 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||||| ||| ||||| || | || | |||||||| || || Sbjct 921242 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGGGGAATTCCTTCCTTGTCTGT 921184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990277153276