Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F000836115.1_202015-02-23] 28 sequences; 32,912,349 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 152 1e-31 seq4 138 3e-27 seq8 93.3 1e-13 seq2 89.7 1e-12 >seq1 Length=6183525 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || ||||||||||| ||||| ||||| || ||| || ||| Sbjct 607583 CAAATCTTTGTCAAGACGCTGACAGGAAAAACCATCACACTCGAAGTCGAATCATCTGAC 607524 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| ||||| || || ||||| |||||||||||| Sbjct 607523 ACCATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATCCCACCGGACCAGCAA 607464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | ||||| || | |||||| | || || ||| || Sbjct 607463 CGCTTGATCTTCGCAGGGAAGCAATTAGAAGACGGTCGAACTCTTTCAGACTACAACATC 607404 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || || ||||| || ||||| | ||| Sbjct 607403 CAGAAGGAATCCACTCTCCATCTCGTCCTGAGATTAAGA 607365 Score = 149 bits (164), Expect = 2e-30 Identities = 145/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| ||||| || |||||||| ||||| ||| | || ||||| || |||||||| Sbjct 608020 TCACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAGT 607961 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| |||||||| ||||| |||||||| || ||||||||||| |||| Sbjct 607960 CCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGAA 607901 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | || || ||||| || | || || ||| || ||| |||| ||||| || || || | Sbjct 607900 AGCAACTTGAAGACGGCCGCACCCTGAGCGACTACAACATCCAGAAAGAGTCCACCCTCC 607841 Query 178123 ATCTTGT 178129 ||||||| Sbjct 607840 ATCTTGT 607834 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| || || || |||||||||||||| ||| || || Sbjct 607811 CAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCTGAT 607752 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||||||||| || |||||||| ||||| ||||||||| Sbjct 607751 ACCATCGACAATGTAAAGAGCAAGATTCAGGATAAGGAAGGAATTCCTCCCGACCAGCAA 607692 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || || |||||||| | || || | || || ||| | Sbjct 607691 CGCTTGATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACCCTCTCAGACTACAACATT 607632 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 607631 CAGAAGGAATCGACCCTTCACCTTGT 607606 >seq4 Length=3791951 Score = 138 bits (152), Expect = 3e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || ||||||||||||||||| || ||||||||| Sbjct 1156314 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1156255 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| ||||| ||||| || |||||||||||| | Sbjct 1156254 GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCACCTGACCAGCAACGATTG 1156195 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 |||||||||||||| || ||||| || || Sbjct 1156194 ATCTTCGCCGGAAAGCAACTCGAGGACGG 1156166 >seq8 Length=2671506 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| |||||||| || || ||||||||||| || |||||||||||||| || ||||| Sbjct 921187 GACAAGGAAGGAATTCCCCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAACTCGAG 921246 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | ||||| |||| || ||| |||| || || || || || || || || Sbjct 921247 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 921302 >seq2 Length=3929205 Score = 89.7 bits (98), Expect = 1e-12 Identities = 184/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 214123 CCAAAGTTTTTCTGGTTGCTTTTG-CGGCAAATGGCATCTTTGTATGCGATGAAAGGCAT 214181 || ||||| ||||||||||| || || ||| |||| ||||| |||| |||| | Sbjct 1716629 CCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATG-CATCCTTGTACAGGATGTAAGGTGT 1716571 Query 214182 TCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTT 214241 || ||| ||||| ||||||| || ||| || | || ||||| || || Sbjct 1716570 ACCGGTCTCAGTCTGAGCCTCAAGAATAGCATACCACAGCTTCTGAGCCTTGACAGTCTG 1716511 Query 214242 TTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAA--TTCCGAACCGTAG 214299 | | ||| || |||||||| || ||||| |||| ||| || || || || ||| Sbjct 1716510 GCGACCACGTCCTTCTTTTTCGTATTTCTCATAGAGAGCCTCGAACTTTTCG--CCATAG 1716453 Query 214300 ACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTG 214359 |||||| |||||||||||||||| | |||||||| || |||| | || | | Sbjct 1716452 ACATCAGCAAGACCGGGAGCCTCATGAGGGCAGAAGAGGGTCCAATCCTGGTTTTTCTCA 1716393 Query 214360 ACTCTTTTCATGAAAAGGTCGGAAGTCCA 214388 || | ||||||||||| || | |||||| Sbjct 1716392 ACACGCTTCATGAAAAGATCAGGAGTCCA 1716364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730768161432