Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=5022262 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| || |||||| ||||| ||||| || |||||| || | || || Sbjct 2612001 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCA 2611942 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||||||||| ||||| ||||| || |||| || | || ||||||||| | Sbjct 2611941 AGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGG 2611882 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 || || |||| ||| | | | || ||||| ||||| || || | |||||||| || Sbjct 2611881 ATCTTGGACTTGA-CGTTGTCGATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTT 2611823 Query 43154 GCCCGT 43159 ||| || Sbjct 2611822 GCCGGT 2611817 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||| | ||||| |||||||| || ||||| |||| ||| || || | || Sbjct 2612689 CAACACCAAATGGAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATC 2612630 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | |||||| || || || || | |||||| || || | || | | ||||||||| Sbjct 2612629 CTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGGGGGATACCCTCCTTGTC 2612570 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 ||| || ||||| ||| | | | || || || || || || | || || | Sbjct 2612569 TTGGATCTTCGATTTGA-CGTTGTCAATGGTATCAGATGACTCGACTTCCAAAGTAATCG 2612511 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| || ||||| |||||||| ||||| Sbjct 2612510 TCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 2612477 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || ||||| || | || || || |||| || || ||||| || ||||| Sbjct 2612211 TCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 2612152 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || || || ||||| | || | || |||||| ||| ||| | || | | ||| Sbjct 2612151 ATCAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTATCC-TGAATCTTGGACTTCACGTT 2612093 Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| ||||| || || | |||||||| ||||| || || ||||| || Sbjct 2612092 GTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 2612033 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 2612032 AAAGATTTGCAT 2612021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817328386640