Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 389 4e-103 seq1 107 2e-18 >seq5 Length=2876130 Score = 389 bits (430), Expect = 4e-103 Identities = 1240/1900 (65%), Gaps = 52/1900 (3%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGC-GGCCGGTTTGGTGCGAAGATAATACATGC 22163 || ||| || || ||||| |||| || || ||| | | || || || || ||||||| Sbjct 2653387 CTGGTCGACGGTGAACTGAATGG-GTGCGCTGGCAGCCATTGTACGGAGGTAGTACATGC 2653329 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||||| ||||||||||| || ||| || || || || | || || | | | Sbjct 2653328 CAGTCTTCAAGCCCATCTTCCAGCCGGCAAAGTGCATGGATGTGATCTTGCCCATAGTTG 2653269 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || | || || | |||| || ||| ||| || || || || || || ||||| | Sbjct 2653268 GCTCCTTCAAGTGAATGTTGAGGGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCAG 2653209 Query 22284 CCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGAT 22341 |||| | || | | ||| ||| |||||||| || |||||||| || | ||| Sbjct 2653208 CCATCTGTAGAATATTGCGCT--GACTGATTTCCCAGACAGTCTTGTAGAGAGCCTTGAG 2653151 Query 22342 CTCTAACGGTATCGATTCGA-TCCTCTGGA-CGGACC--CGTTATTGTGTATGATCAAAT 22397 || ||| || | | || | |||| | || ||| ||| | ||||| | Sbjct 2653150 GTCGGCCGGGAT-GTTGGGAATGTTCTGAATCGAACCACCGTCAGAA---ATGATACGGT 2653095 Query 22398 TTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTC 22456 | || || | ||| ||| | ||| | | | ||||| || | || | | || || Sbjct 2653094 TCTTCATGTTGTCGGACCAAAGACCAAGGTCAACTAAATCCTTCAGCA-ACCATGGATTG 2653036 Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || | ||| || ||||| | ||| || || || ||| ||||| || ||| | || ||| Sbjct 2653035 ACGATTTGGAATTCGCCAGCCAATACACGTCGAGAGTAGATGTTTGACGTGTATGGCTCG 2652976 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || |||| ||||| |||| ||||||| || || || || ||||| || || | || Sbjct 2652975 AAGCATTCGTTGTTACCCAAGATCTGAGATGTGGATGCAGTGGGCATGGGAGCAACAAGA 2652916 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGA 22636 || ||||| | | || ||||||| ||||| | ||| || | |||||||||||| Sbjct 2652915 AGAGAGTTGCGGACACCATGCTTTGCAATTTCAGCCTTCAGGCTGTCCCAGTCCCACAGG 2652856 Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGCCGG 22692 || | ||| || ||||| ||||||||| ||||| | ||||| | |||| || Sbjct 2652855 TCTGTCGGAGTAACATT---CCACATATCATATTGAAGGACGCCTTGGGAGACT----GG 2652803 Query 22693 GCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAA 22752 ||||| || || || | || || || | | ||| || ||||| || ||| Sbjct 2652802 ACTGCCCTCATATGTCTGATAAGGGCCTTGCTCCTTGGCGAGCTCGCATGAGGCTGTCAA 2652743 Query 22753 CGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGG-----CGGCGACG 22807 ||| ||| ||| || ||||||||||| | |||| | | | ||| |||||| Sbjct 2652742 GGCGGCGTGATAGATGGTCTCGAAGATCTGGATGTTGAGCT-GTCGGGCTTCCGGCGA-- 2652686 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 || | |||| ||| | | ||| || || |||| ||| || || || | ||| Sbjct 2652685 --GTCAAAAGGCAGACGAAGGGCAAGGAAAGCATCTGCCAGACCTTGTACACCGAGACCA 2652628 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCG 22927 || ||||||| | || || || |||||||| | |||||| | || ||| Sbjct 2652627 ATTGGTCGGTGTCGCATGTTGCTGTTCTTGGCCTCGGGAACAGGATAGTAGTTGATGTCG 2652568 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || || |||||||||| | ||| || | || || | | ||||| Sbjct 2652567 ATAATTTTGTTCAAGTTGCGGGTGACGACTTGAGTAACCTCGTGGAGACGACCGAAGTCA 2652508 Query 22988 TA---AACGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACG 23044 || | ||| | ||| | ||||| | | ||| | ||| ||||||||||| || Sbjct 2652507 TATTCACCGCGGGCTTGGTCGACAAAGGTCGGCAGGGCCAGCGAAGCAAGATTGCAGACA 2652448 Query 23045 GCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATC 23104 || ||||||||| | |||||||| || |||||||| || ||||| | | || Sbjct 2652447 GCAACCTCGTCTGGCGCAGTGTACTCGACGATTTCGGTGCAAAGATTTGAGCTCCGAATT 2652388 Query 23105 GTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGC 23164 || |||| || |||||||||| || ||||| | ||||||||| ||||| ||||| Sbjct 2652387 GTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATATACGGA 2652328 Query 23165 GTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAG-CGTGAACACG 23223 || || |||||| || | || | || || ||||| |||||| | ||| Sbjct 2652327 GTACCGGTCTCGGTTTGTGCTTCAAGAATAGCATACCACAATTTCTGAGCCTTGATGGTC 2652268 Query 23224 TCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA 23283 | || || | ||| ||| || || | ||| | || ||||| || | || || Sbjct 2652267 TGGCGACCACGTCCCTCCTT-TTCATATCGCTCGTAGAGAGCCTCAAACTCCTCGCCATA 2652209 Query 23284 -ACAGTCGGCCAGGCCGGGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTT 23341 ||| || || || || || | | ||| || || | ||| |||| | || || Sbjct 2652208 GACA-TCAGCAAGACCCGGTGCCT-CATGAGGGCAGAAGAGGGTCCAGTCTTGGTTCTTC 2652151 Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || ||||| ||||| || || || || |||| ||||| |||||||| || ||||| || Sbjct 2652150 TCGACGCGGCTCATGAACAGGTCAGGAGTCCAGAGAGCATAGAACAGATCACGGGCACGG 2652091 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || || ||||||||| |||||| ||| | ||| ||||| || || || || ||||| Sbjct 2652090 ACTTCTTCTTTGCCGTGATTCTTTCTCAGGTTCAAGAAGTCAAAAACATCAGCGTGCCAG 2652031 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| ||||| | |||||| || || || | ||| ||||| ||||| || || || ||| Sbjct 2652030 GGCTCAAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGG 2651971 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| | || | ||||| || | ||| || || |||| ||| ||| Sbjct 2651970 GCAGTGTTGTTGAAGACACGAAGCATGGGGATGAGGCCATTCGACGTGCCATTAGTGCCG 2651911 Query 23582 GCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641 || | || || | || |||| | |||| | | ||||| || || || | | Sbjct 2651910 GCAATGTATGAGCCGGTGGCACGAATGCAGTGAGCATTCAAACCGATACCGCCAGCAGTC 2651851 Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701 || || ||||| || || ||||| || |||||||| ||||| |||||||| || Sbjct 2651850 TTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCGGACTTC 2651791 Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761 | ||| || ||| || || |||| ||| | || || || |||| ||||| || Sbjct 2651790 ATGTCGATCAGGAAGCATGACGACAGTTGAGGTTGAGGTGTTCCGGCGTTGAACAAGGTT 2651731 Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821 || ||| || || ||| | | ||||| || | |||||| || | | ||| Sbjct 2651730 GGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTACGTCTCAAGCACCTTATCG 2651671 Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--GA 23879 | || || ||||| || || | | ||| ||||| | ||||| ||| |||| ||| | Sbjct 2651670 ACATCATCACCGTGGATGCCCACAGAGACACGCATGAGCATGTGTTGTGGTCGCTCAGCA 2651611 Query 23880 CCGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 | || ||| ||| || | ||||||||| | || || ||| || || ||||||||| Sbjct 2651610 ACTTGCTTGCC---AATCTTCAGCAGATATGATCTTTCCAACGTCTTGAAGCCAAAATAG 2651554 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 | ||||| ||||| || |||| || |||||||| |||| Sbjct 2651553 TTGTAGTTGAAGTCTCGGTCGTATACGATGGCCGAGTTCA 2651514 >seq1 Length=5022262 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || |||||||| ||||| |||| |||||| | || Sbjct 2612249 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACTATCACACTCGAAGTTGAATCCTCA 2612308 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGA-ATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || ||| || | || ||||| |||||| | || |||||||| Sbjct 2612309 GACACAATCGACAACGT-AAAGAGCAAGATTCAAGACAAAGAAGGCATCCCACCCGACCA 2612367 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || | || || || || || || |||||||| | ||| | ||||| || Sbjct 2612368 ACAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTCTCTCAGATTACAA 2612427 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||||||||| || || ||||| || | |||||| | || || Sbjct 2612428 CATCCAAAAAGAATCCACGCTACATCTCGTCTTGAGACTGCGAGGTGG 2612475 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| | || || ||| | ||| | |||| | ||||| Sbjct 2611817 ACCGGCAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATCGACAACGTCAAGTCC 2611876 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||||||| | || ||||| || ||||| || || |||||||| || Sbjct 2611877 AAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAACAGCGCCTCATCTTCGCTGGTAAG 2611936 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | ||||| ||| ||||||| || |||||||| || || ||||| | || Sbjct 2611937 CAGCTTGAAGATGGCCGCACTCTGAGCGACTACAACATTCAGAAGGAGTCGACCTTGCAC 2611996 Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421 |||| ||| | || | ||||||| Sbjct 2611997 TTGGTTCTTCGTCTTCGTGGCGGTA 2612021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766188260960