Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20spinifera_20[genbank_20GCA_5F001599535.1_202016-03-01] 38 sequences; 32,702,796 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 1e-12 >seq5 Length=2876130 Score = 89.7 bits (98), Expect = 1e-12 Identities = 175/256 (68%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || ||||||||||||||||| || || ||| || ||||| || |||||| Sbjct 2651868 CCGATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCC 2651809 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGT 94904 |||||||| || | | | | | |||||||| || || ||||| ||| ||| ||| Sbjct 2651808 TCAATGCTGTCGGACTTCATGTCGATCAGGAAGCATGACGACAGTTGAGGT-TGAGGTGT 2651750 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || |||| || || || ||||| || || | | | |||||||| | || Sbjct 2651749 TCCGGCGTTGAACAAGGTTGGCGAGGCATGAGTGAAGCACTTCTGAGACATGAGGTGGTA 2651690 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || |||| || | || || ||||| ||||| |||| |||||||| | ||| Sbjct 2651689 CGTCTCAAGCACCTTATCGACATCATCACCGTGGATGCCCACAGAGACACGCATGAGCAT 2651630 Query 95025 GTCCTGAGGGCGCTCA 95040 || || || |||||| Sbjct 2651629 GTGTTGTGGTCGCTCA 2651614 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669 || ||||| ||||| | ||||| ||| |||| ||| |||| |||||| | |||||| Sbjct 2652999 TAGATGTTTGACGTGTATGGCTCGAAGCATTCGTTGTTACCCAAGATCTGAGATGTGGAT 2652940 Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTT 93716 ||||| |||||||||||||||| | || ||| | ||||||| ||| Sbjct 2652939 GCAGTGGGCATGGGAGCAACAAGAAGAGAGTTGCGGACACCATGCTT 2652893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583518196290